Variant report
| Variant | rs552117008 |
|---|---|
| Chromosome Location | chr18:43978043-43978044 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:43956400-43978400 | Weak transcription | Liver | Liver |
| 2 | chr18:43964400-43980800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 3 | chr18:43967800-43981000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr18:43968000-43980000 | Weak transcription | Brain Germinal Matrix | brain |
| 5 | chr18:43968800-43981400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 6 | chr18:43969200-43985200 | Weak transcription | Right Atrium | heart |
| 7 | chr18:43970000-43979200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 8 | chr18:43972200-43979200 | Weak transcription | Fetal Brain Male | brain |
| 9 | chr18:43973600-43991400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr18:43974000-43978400 | Weak transcription | Fetal Stomach | stomach |
| 11 | chr18:43974200-43990400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 12 | chr18:43974600-43979000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 13 | chr18:43974600-43980000 | Weak transcription | Left Ventricle | heart |
| 14 | chr18:43975200-43983400 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 15 | chr18:43975600-43978800 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 16 | chr18:43975800-43978400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 17 | chr18:43976400-43980000 | Weak transcription | Fetal Brain Female | brain |
| 18 | chr18:43976600-43978600 | Enhancers | Esophagus | oesophagus |
| 19 | chr18:43976600-43981000 | Enhancers | Fetal Muscle Trunk | muscle |
| 20 | chr18:43977000-43978400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 21 | chr18:43977000-43979000 | Enhancers | Adipose Nuclei | Adipose |
| 22 | chr18:43977000-43983200 | Enhancers | Fetal Muscle Leg | muscle |
| 23 | chr18:43977200-43978200 | Flanking Active TSS | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 24 | chr18:43977200-43978400 | ZNF genes & repeats | Primary T cells fromperipheralblood | blood |
| 25 | chr18:43977200-43978400 | Enhancers | Primary hematopoietic stem cells | blood |
| 26 | chr18:43977200-43978400 | Enhancers | K562 | blood |
| 27 | chr18:43977200-43978800 | Enhancers | GM12878-XiMat | blood |
| 28 | chr18:43977200-43983000 | Weak transcription | Psoas Muscle | Psoas |
| 29 | chr18:43977400-43978200 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 30 | chr18:43977600-43978400 | Genic enhancers | Spleen | Spleen |
| 31 | chr18:43977800-43978400 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
| 32 | chr18:43977800-43978400 | Enhancers | Pancreas | Pancrea |
| 33 | chr18:43977800-43979200 | Enhancers | Fetal Heart | heart |
| 34 | chr18:43978000-43978200 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 35 | chr18:43978000-43978200 | Flanking Active TSS | Fetal Lung | lung |
| 36 | chr18:43978000-43978400 | Enhancers | Fetal Thymus | thymus |
| 37 | chr18:43978000-43980600 | Enhancers | Right Ventricle | heart |
