Variant report

Variant rs552161110
Chromosome Location chr22:23411650-23411651
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23409200-23411800 Enhancers Left Ventricle heart
2 chr22:23410400-23411800 Weak transcription Primary B cells from cord blood blood
3 chr22:23410800-23411800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr22:23411200-23412000 Bivalent Enhancer Fetal Stomach stomach
5 chr22:23411200-23412000 Enhancers Gastric stomach
6 chr22:23411200-23412000 Enhancers Spleen Spleen
7 chr22:23411200-23412400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
8 chr22:23411400-23411800 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr22:23411400-23411800 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
10 chr22:23411400-23411800 Enhancers Adipose Nuclei Adipose
11 chr22:23411400-23411800 Flanking Active TSS Brain Angular Gyrus brain
12 chr22:23411400-23411800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
13 chr22:23411400-23411800 Enhancers Fetal Kidney kidney
14 chr22:23411400-23411800 Bivalent Enhancer Fetal Muscle Leg muscle
15 chr22:23411400-23411800 Enhancers Pancreas Pancrea
16 chr22:23411400-23411800 Flanking Active TSS Hela-S3 cervix
17 chr22:23411400-23412000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
18 chr22:23411400-23412000 Flanking Active TSS Brain Anterior Caudate brain
19 chr22:23411400-23412000 Enhancers Lung lung
20 chr22:23411400-23412200 Flanking Active TSS Brain Hippocampus Middle brain
21 chr22:23411400-23412200 Flanking Active TSS Fetal Brain Male brain
22 chr22:23411400-23412200 Flanking Active TSS Stomach Smooth Muscle stomach
23 chr22:23411400-23412200 Flanking Bivalent TSS/Enh HepG2 liver
24 chr22:23411600-23411800 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
25 chr22:23411600-23411800 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
26 chr22:23411600-23411800 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
27 chr22:23411600-23411800 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr22:23411600-23411800 Bivalent Enhancer Primary monocytes fromperipheralblood blood
29 chr22:23411600-23411800 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr22:23411600-23411800 Enhancers Primary T helper cells PMA-I stimulated --
31 chr22:23411600-23411800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr22:23411600-23411800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr22:23411600-23411800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr22:23411600-23411800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
35 chr22:23411600-23411800 Flanking Active TSS Brain Substantia Nigra brain
36 chr22:23411600-23411800 Bivalent/Poised TSS Duodenum Mucosa Duodenum
37 chr22:23411600-23411800 Bivalent Enhancer Duodenum Smooth Muscle Duodenum
38 chr22:23411600-23411800 Flanking Active TSS Fetal Brain Female brain
39 chr22:23411600-23411800 Bivalent Enhancer Fetal Muscle Trunk muscle
40 chr22:23411600-23411800 Enhancers Ovary ovary
41 chr22:23411600-23411800 Active TSS Rectal Mucosa Donor 29 rectum
42 chr22:23411600-23411800 Enhancers Rectal Smooth Muscle rectum
43 chr22:23411600-23411800 Genic enhancers Right Atrium heart
44 chr22:23411600-23411800 Enhancers HSMM muscle
45 chr22:23411600-23411800 Bivalent Enhancer K562 blood
46 chr22:23411600-23411800 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
47 chr22:23411600-23412000 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr22:23411600-23412000 Enhancers Primary B cells from peripheral blood blood
49 chr22:23411600-23412000 Bivalent Enhancer Primary T cells fromperipheralblood blood
50 chr22:23411600-23412000 Enhancers Primary Natural Killer cells fromperipheralblood blood

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