Variant report

Variant	rs552162654
Chromosome Location	chr11:16011565-16011566
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:16006435..16009165-chr11:16010685..16012252,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832074	chr11:15927105-16100772	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	esv3445269	chr11:16011562-16012077	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15990400-16011600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:15993000-16012800	Weak transcription	Right Ventricle	heart
3	chr11:15998200-16011600	Weak transcription	Aorta	Aorta
4	chr11:15999400-16022800	Weak transcription	K562	blood
5	chr11:16004800-16024600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr11:16007800-16023000	Weak transcription	Duodenum Mucosa	Duodenum
7	chr11:16008000-16022800	Weak transcription	Fetal Intestine Small	intestine
8	chr11:16008800-16013800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr11:16010200-16011600	Enhancers	Ovary	ovary
10	chr11:16010200-16012000	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr11:16010600-16015000	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr11:16010800-16012800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr11:16010800-16015000	Weak transcription	Psoas Muscle	Psoas
14	chr11:16010800-16021600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr11:16010800-16022800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr11:16010800-16022800	Weak transcription	Fetal Intestine Large	intestine
17	chr11:16011000-16015000	Weak transcription	Fetal Muscle Leg	muscle
18	chr11:16011000-16019200	Weak transcription	Right Atrium	heart
19	chr11:16011000-16033800	Weak transcription	Left Ventricle	heart
20	chr11:16011200-16011800	Enhancers	Fetal Lung	lung
21	chr11:16011200-16021400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr11:16011400-16023000	Weak transcription	Cortex derived primary cultured neurospheres	brain

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