The 2.0 version of rSNPBase

Variant report

Variant rs552205884
Chromosome Location chr10:95851385-95851386
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:95831400-95864200 Weak transcription Colonic Mucosa Colon
2 chr10:95836600-95861400 Weak transcription Pancreas Pancrea
3 chr10:95836600-95863400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr10:95837600-95876000 Weak transcription Fetal Intestine Large intestine
5 chr10:95843400-95864000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr10:95845400-95852600 Weak transcription HSMMtube muscle
7 chr10:95845400-95860600 Weak transcription Spleen Spleen
8 chr10:95845400-95867800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr10:95845600-95853400 Weak transcription Lung lung
10 chr10:95846400-95851600 Weak transcription Brain Germinal Matrix brain
11 chr10:95847800-95860600 Weak transcription Fetal Intestine Small intestine
12 chr10:95848600-95851400 Active TSS Stomach Smooth Muscle stomach
13 chr10:95849000-95852400 Weak transcription Muscle Satellite Cultured Cells --
14 chr10:95849000-95862200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr10:95849000-95862400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr10:95849200-95852600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr10:95849200-95852600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr10:95849200-95852600 Weak transcription A549 lung
19 chr10:95849200-95852600 Weak transcription Osteobl bone
20 chr10:95849200-95853000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr10:95849200-95858600 Weak transcription Fetal Brain Female brain
22 chr10:95849200-95858600 Weak transcription Fetal Muscle Leg muscle
23 chr10:95849200-95863200 Weak transcription Rectal Smooth Muscle rectum
24 chr10:95850000-95851400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr10:95850000-95851800 Enhancers Cortex derived primary cultured neurospheres brain
26 chr10:95850200-95851400 Enhancers Brain Cingulate Gyrus brain
27 chr10:95850400-95852800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr10:95850400-95863400 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr10:95850600-95851400 Weak transcription Brain Anterior Caudate brain
30 chr10:95850600-95854400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr10:95850600-95854400 Weak transcription Left Ventricle heart
32 chr10:95850600-95858400 Weak transcription Fetal Lung lung
33 chr10:95850800-95851600 Enhancers HUES64 Cell Line embryonic stem cell
34 chr10:95850800-95857400 Weak transcription Right Atrium heart
35 chr10:95851000-95851800 Enhancers HUES48 Cell Line embryonic stem cell
36 chr10:95851000-95852200 Enhancers Brain Hippocampus Middle brain
37 chr10:95851200-95851800 Enhancers Adipose Nuclei Adipose
38 chr10:95851200-95852800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr10:95851200-95853000 Weak transcription Fetal Stomach stomach
40 chr10:95851200-95853200 Weak transcription Ovary ovary
41 chr10:95851200-95853400 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015