Variant report

Variant rs552272648
Chromosome Location chr4:166176546-166176547
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:166129600-166196800 Weak transcription Pancreas Pancrea
2 chr4:166130400-166176800 Weak transcription Fetal Intestine Small intestine
3 chr4:166130600-166200800 Weak transcription Lung lung
4 chr4:166131600-166196800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr4:166132200-166193800 Weak transcription Fetal Brain Female brain
6 chr4:166136000-166176800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr4:166137800-166194200 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr4:166138400-166185600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr4:166142800-166176800 Weak transcription Duodenum Mucosa Duodenum
10 chr4:166144600-166218800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr4:166152000-166176600 Weak transcription Fetal Stomach stomach
12 chr4:166156200-166199200 Weak transcription Ovary ovary
13 chr4:166161200-166176800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr4:166167400-166177000 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr4:166170000-166210000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr4:166170600-166176600 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr4:166170600-166209600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr4:166175000-166176800 Enhancers Primary hematopoietic stem cells short term culture blood
19 chr4:166175000-166176800 Enhancers Brain Anterior Caudate brain
20 chr4:166175000-166180000 Enhancers Fetal Heart heart
21 chr4:166175200-166176800 Weak transcription Fetal Intestine Large intestine
22 chr4:166175400-166176800 Weak transcription Right Ventricle heart
23 chr4:166175400-166177400 Weak transcription Brain Germinal Matrix brain
24 chr4:166175600-166176800 Enhancers HepG2 liver
25 chr4:166175800-166177200 Enhancers Brain Angular Gyrus brain
26 chr4:166175800-166177400 Enhancers Brain Substantia Nigra brain
27 chr4:166175800-166177400 Enhancers GM12878-XiMat blood
28 chr4:166175800-166177400 Enhancers HUVEC blood vessel
29 chr4:166176000-166176800 Enhancers Brain Hippocampus Middle brain
30 chr4:166176000-166176800 Enhancers Dnd41 blood
31 chr4:166176000-166177000 Enhancers Primary T cells from cord blood blood
32 chr4:166176000-166177000 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr4:166176000-166177000 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr4:166176000-166177000 Enhancers Liver Liver
35 chr4:166176000-166177200 Enhancers Primary T helper cells fromperipheralblood blood
36 chr4:166176000-166177400 Enhancers Adipose Nuclei Adipose
37 chr4:166176000-166177400 Enhancers Spleen Spleen
38 chr4:166176000-166177600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr4:166176000-166177800 Enhancers Primary B cells from peripheral blood blood
40 chr4:166176000-166177800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr4:166176000-166178800 Enhancers Primary monocytes fromperipheralblood blood
42 chr4:166176200-166176600 Enhancers K562 blood
43 chr4:166176200-166176800 Enhancers Primary B cells from cord blood blood
44 chr4:166176200-166176800 Enhancers Brain Cingulate Gyrus brain
45 chr4:166176200-166177600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
46 chr4:166176200-166178400 Enhancers Primary hematopoietic stem cells blood
47 chr4:166176400-166176600 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr4:166176400-166176800 Enhancers Brain Inferior Temporal Lobe brain
49 chr4:166176400-166177000 Enhancers Primary T helper naive cells from peripheral blood blood
50 chr4:166176400-166177000 Enhancers Primary T helper cells PMA-I stimulated --

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