Variant report

Variant	rs552275851
Chromosome Location	chr14:47710522-47710523
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:31 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040847	chr14:46905206-47869359	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv542085	chr14:46905206-47869359	ZNF genes & repeats Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1049865	chr14:46905406-47869220	Enhancers Bivalent/Poised TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv542087	chr14:46905406-47869220	Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv1048316	chr14:47297113-47885723	Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv901890	chr14:47594099-47729711	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv901892	chr14:47620548-47729711	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv1046326	chr14:47629646-47845903	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	nsv901893	chr14:47633066-47715509	Enhancers ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
10	nsv456302	chr14:47650921-47715621	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
11	nsv564772	chr14:47650921-47715621	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
12	nsv564773	chr14:47697802-47717798	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv564774	chr14:47702469-47729127	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv564775	chr14:47705664-47717798	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv2761399	chr14:47707336-47717447	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv3389558	chr14:47707533-47717865	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv10012	chr14:47707591-47717843	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
18	nsv517301	chr14:47708397-47715621	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
19	nsv456303	chr14:47708397-47715621	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
20	nsv564776	chr14:47708397-47715621	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
21	nsv564777	chr14:47708397-47716040	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
22	nsv564778	chr14:47708397-47716344	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
23	nsv564779	chr14:47708397-47717798	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
24	nsv564780	chr14:47708397-47724567	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
25	nsv564781	chr14:47709181-47714443	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
26	nsv564782	chr14:47709181-47716040	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
27	nsv564783	chr14:47709181-47716344	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
28	nsv564784	chr14:47709181-47717798	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
29	nsv564785	chr14:47709799-47716344	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
30	nsv564786	chr14:47709799-47717798	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
31	nsv564787	chr14:47709799-47729127	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:47710200-47710600	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr14:47710200-47710600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr14:47710200-47710600	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr14:47710200-47710600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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