Variant report

Variant rs552315578
Chromosome Location chr11:86286195-86286196
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86263400-86288200 Weak transcription Aorta Aorta
2 chr11:86271000-86291200 Weak transcription Gastric stomach
3 chr11:86275400-86299400 Weak transcription Primary hematopoietic stem cells blood
4 chr11:86276400-86299800 Weak transcription Fetal Brain Male brain
5 chr11:86277400-86287400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr11:86277400-86287600 Weak transcription Colon Smooth Muscle Colon
7 chr11:86277400-86289400 Weak transcription Brain Anterior Caudate brain
8 chr11:86279000-86289000 Weak transcription NHEK skin
9 chr11:86279800-86288000 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr11:86281400-86289200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr11:86282000-86288200 Weak transcription Colonic Mucosa Colon
12 chr11:86282000-86288400 Weak transcription Fetal Intestine Small intestine
13 chr11:86282400-86287600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr11:86283400-86289400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr11:86283400-86289400 Weak transcription Stomach Mucosa stomach
16 chr11:86283600-86288200 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr11:86285000-86288800 Enhancers HUVEC blood vessel
18 chr11:86285200-86286200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr11:86285400-86286200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr11:86285400-86286200 Enhancers Fetal Muscle Leg muscle
21 chr11:86285400-86286800 Enhancers NHDF-Ad bronchial
22 chr11:86285400-86287000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr11:86285400-86288400 Enhancers A549 lung
24 chr11:86285400-86288800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr11:86285400-86288800 Enhancers Right Atrium heart
26 chr11:86285600-86286200 Enhancers Muscle Satellite Cultured Cells --
27 chr11:86285600-86286200 Enhancers Fetal Stomach stomach
28 chr11:86285600-86286200 Enhancers Left Ventricle heart
29 chr11:86285600-86286200 Enhancers Lung lung
30 chr11:86285600-86286200 Enhancers Ovary ovary
31 chr11:86285600-86286200 Enhancers Pancreas Pancrea
32 chr11:86285600-86286200 Enhancers NHLF lung
33 chr11:86285600-86286400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr11:86285600-86286400 Enhancers Fetal Heart heart
35 chr11:86285600-86286400 Enhancers Rectal Mucosa Donor 31 rectum
36 chr11:86285600-86288600 Enhancers Spleen Spleen
37 chr11:86285600-86288800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr11:86285600-86289400 Enhancers NH-A brain
39 chr11:86285600-86290600 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr11:86285800-86286600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr11:86285800-86287000 Weak transcription Hela-S3 cervix
42 chr11:86285800-86287000 Enhancers Osteobl bone
43 chr11:86285800-86287400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr11:86285800-86287400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr11:86285800-86287600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr11:86286000-86286200 Enhancers Fetal Muscle Trunk muscle
47 chr11:86286000-86286200 Enhancers Psoas Muscle Psoas
48 chr11:86286000-86286400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr11:86286000-86286400 Enhancers Placenta Amnion Placenta Amnion
50 chr11:86286000-86286600 Enhancers HMEC breast

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