Variant report

Variant	rs552391737
Chromosome Location	chr3:69882099-69882100
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3507784	chr3:69802539-69959607	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv3507785	chr3:69802539-69959607	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv19391	chr3:69881179-69884045	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69870200-69886000	Weak transcription	Aorta	Aorta
2	chr3:69870600-69886200	Weak transcription	Colon Smooth Muscle	Colon
3	chr3:69873800-69887600	Weak transcription	NHLF	lung
4	chr3:69879600-69884200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr3:69879600-69886000	Weak transcription	Right Atrium	heart
6	chr3:69879600-69886000	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr3:69881200-69886200	Weak transcription	K562	blood
8	chr3:69881400-69886000	Weak transcription	Left Ventricle	heart
9	chr3:69881400-69886000	Weak transcription	Ovary	ovary
10	chr3:69881600-69885600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr3:69881600-69886000	Weak transcription	Right Ventricle	heart
12	chr3:69881800-69882200	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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