Variant report

Variant	rs552431270
Chromosome Location	chr8:94969223-94969224
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754970	chr8:94675324-94991724	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv982128	chr8:94966644-94973304	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv971337	chr8:94969168-94970266	Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:94965400-94969800	Weak transcription	Fetal Lung	lung
2	chr8:94965600-94971800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:94965800-94970200	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr8:94967400-94969400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr8:94967600-94969600	Enhancers	HepG2	liver
6	chr8:94967600-94970200	Weak transcription	Left Ventricle	heart
7	chr8:94968000-94973200	Weak transcription	Ovary	ovary
8	chr8:94968000-94973400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr8:94968200-94970200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr8:94968600-94970200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr8:94968600-94973400	Enhancers	Fetal Intestine Large	intestine
12	chr8:94968600-94973600	Enhancers	Fetal Intestine Small	intestine
13	chr8:94968800-94970800	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr8:94969000-94969600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr8:94969200-94970200	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr8:94969200-94970200	Weak transcription	HUVEC	blood vessel

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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