The 2.0 version of rSNPBase

Variant report

Variant rs552454792
Chromosome Location chr11:34078395-34078396
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34073800-34079000 Transcr. at gene 5' and 3' Dnd41 blood
2 chr11:34074600-34079200 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
3 chr11:34074800-34078800 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr11:34075400-34087000 Weak transcription Gastric stomach
5 chr11:34075400-34094200 Weak transcription Placenta Amnion Placenta Amnion
6 chr11:34075400-34094400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr11:34075400-34103800 Weak transcription Aorta Aorta
8 chr11:34075600-34078400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr11:34075600-34079000 Enhancers Brain Hippocampus Middle brain
10 chr11:34075600-34079400 Weak transcription Psoas Muscle Psoas
11 chr11:34075600-34082600 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr11:34075600-34082600 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr11:34075600-34082800 Enhancers Primary T killer memory cells from peripheral blood blood
14 chr11:34075600-34088400 Weak transcription Right Atrium heart
15 chr11:34075600-34093600 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr11:34075600-34100200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr11:34075800-34078400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr11:34075800-34079600 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr11:34075800-34083400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr11:34075800-34093600 Weak transcription HSMMtube muscle
21 chr11:34076000-34078400 Weak transcription Brain Angular Gyrus brain
22 chr11:34076000-34078400 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr11:34076000-34079000 Enhancers Fetal Heart heart
24 chr11:34076000-34079200 Genic enhancers Cortex derived primary cultured neurospheres brain
25 chr11:34076200-34078400 Genic enhancers NHDF-Ad bronchial
26 chr11:34076200-34081400 Strong transcription HSMM muscle
27 chr11:34076200-34089400 Weak transcription H9 Cell Line embryonic stem cell
28 chr11:34076400-34079000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr11:34076400-34079200 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
30 chr11:34076400-34079200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr11:34076400-34079600 Transcr. at gene 5' and 3' GM12878-XiMat blood
32 chr11:34076600-34078400 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr11:34076600-34078400 Genic enhancers NH-A brain
34 chr11:34076600-34079000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr11:34076600-34079000 Genic enhancers Muscle Satellite Cultured Cells --
36 chr11:34076600-34079000 Genic enhancers Fetal Intestine Large intestine
37 chr11:34076600-34079200 Genic enhancers Primary T helper cells fromperipheralblood blood
38 chr11:34076600-34079200 Genic enhancers HUVEC blood vessel
39 chr11:34076600-34079600 Enhancers Fetal Brain Male brain
40 chr11:34076600-34080200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr11:34076800-34078400 Enhancers Rectal Mucosa Donor 31 rectum
42 chr11:34076800-34078400 Genic enhancers NHEK skin
43 chr11:34076800-34079000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr11:34076800-34080200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr11:34077000-34079000 Enhancers Brain Substantia Nigra brain
46 chr11:34077000-34100600 Weak transcription Esophagus oesophagus
47 chr11:34077200-34078400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
48 chr11:34077200-34078400 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr11:34077200-34078400 Weak transcription Small Intestine intestine
50 chr11:34077200-34078600 Weak transcription Primary monocytes fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015