Variant report

Variant rs552457567
Chromosome Location chr9:139782870-139782871
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139782000-139783000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr9:139782000-139783000 Weak transcription Stomach Mucosa stomach
3 chr9:139782000-139783200 Enhancers Primary T helper cells fromperipheralblood blood
4 chr9:139782000-139784200 Weak transcription Lung lung
5 chr9:139782000-139784400 Weak transcription Ovary ovary
6 chr9:139782000-139790400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr9:139782000-139792600 Weak transcription Small Intestine intestine
8 chr9:139782000-139793800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr9:139782000-139794800 Weak transcription Aorta Aorta
10 chr9:139782200-139783000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr9:139782200-139783000 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr9:139782200-139783000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr9:139782200-139783000 Enhancers Spleen Spleen
14 chr9:139782200-139783200 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr9:139782200-139783200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr9:139782200-139783200 Enhancers Duodenum Mucosa Duodenum
17 chr9:139782200-139783200 Enhancers Right Ventricle heart
18 chr9:139782200-139783400 Enhancers Primary T cells fromperipheralblood blood
19 chr9:139782200-139783400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr9:139782200-139783400 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr9:139782200-139783400 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr9:139782200-139783400 Enhancers Liver Liver
23 chr9:139782200-139783600 Enhancers Primary T regulatory cells fromperipheralblood blood
24 chr9:139782200-139783600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr9:139782200-139784000 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr9:139782200-139784000 Weak transcription Fetal Stomach stomach
27 chr9:139782200-139784000 Weak transcription Placenta Amnion Placenta Amnion
28 chr9:139782200-139784000 Weak transcription Thymus Thymus
29 chr9:139782200-139784000 Weak transcription NH-A brain
30 chr9:139782200-139784200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr9:139782200-139784200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr9:139782200-139784200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr9:139782200-139784200 Weak transcription Adipose Nuclei Adipose
34 chr9:139782200-139784200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr9:139782200-139784200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr9:139782200-139784200 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr9:139782200-139784400 Weak transcription H1 Cell Line embryonic stem cell
38 chr9:139782200-139784400 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr9:139782200-139784400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr9:139782200-139784400 Weak transcription Primary T cells from cord blood blood
41 chr9:139782200-139784400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr9:139782200-139784400 Weak transcription Esophagus oesophagus
43 chr9:139782200-139784400 Weak transcription Pancreas Pancrea
44 chr9:139782200-139784600 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr9:139782200-139784600 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr9:139782200-139784600 Weak transcription Stomach Smooth Muscle stomach
47 chr9:139782200-139784600 Weak transcription Osteobl bone
48 chr9:139782200-139784800 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr9:139782200-139784800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr9:139782200-139784800 Weak transcription Brain Germinal Matrix brain

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