Variant report

Variant	rs552512484
Chromosome Location	chr18:25828814-25828815
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv9622	chr18:25749905-26032816	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2480689	chr18:25827295-25828818	Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:25828600-25829200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr18:25828600-25829200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr18:25828800-25829200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr18:25828800-25829200	Enhancers	H1 Cell Line	embryonic stem cell
5	chr18:25828800-25829200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr18:25828800-25829200	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr18:25828800-25829200	Enhancers	iPS-18 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links