Variant report

Variant	rs552523575
Chromosome Location	chr14:68516203-68516204
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv977622	chr14:68514820-68532469	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68503600-68519800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr14:68509000-68517200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr14:68511600-68518400	Weak transcription	Fetal Lung	lung
4	chr14:68514600-68518600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr14:68514800-68518200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr14:68514800-68522600	Weak transcription	HSMM	muscle
7	chr14:68514800-68527000	Weak transcription	Ovary	ovary
8	chr14:68515600-68518000	Weak transcription	Primary B cells from cord blood	blood
9	chr14:68516200-68516400	ZNF genes & repeats	Fetal Intestine Small	intestine
10	chr14:68516200-68516600	ZNF genes & repeats	Primary hematopoietic stem cells	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links