Variant report

Variant rs552571821
Chromosome Location chr5:115730684-115730685
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115697600-115748400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr5:115707600-115748400 Weak transcription Fetal Intestine Large intestine
3 chr5:115708600-115754000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr5:115718400-115737000 Weak transcription Primary B cells from cord blood blood
5 chr5:115718600-115748400 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr5:115718800-115731000 Weak transcription Spleen Spleen
7 chr5:115719400-115734800 Weak transcription Primary T cells from cord blood blood
8 chr5:115723000-115776000 Weak transcription Primary hematopoietic stem cells blood
9 chr5:115723600-115784800 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr5:115724800-115745600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr5:115724800-115749200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr5:115726200-115731600 Weak transcription Aorta Aorta
13 chr5:115728400-115730800 Weak transcription Fetal Intestine Small intestine
14 chr5:115729400-115733200 Enhancers Psoas Muscle Psoas
15 chr5:115729400-115733200 Enhancers Skeletal Muscle Male skeletal muscle
16 chr5:115729400-115733200 Enhancers Skeletal Muscle Female skeletal muscle
17 chr5:115730000-115731000 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr5:115730000-115732800 Enhancers Rectal Smooth Muscle rectum
19 chr5:115730200-115730800 Enhancers Stomach Smooth Muscle stomach
20 chr5:115730200-115731600 Enhancers Fetal Muscle Trunk muscle
21 chr5:115730200-115731800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr5:115730200-115732600 Enhancers Esophagus oesophagus
23 chr5:115730200-115732600 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr5:115730200-115732800 Enhancers Fetal Muscle Leg muscle
25 chr5:115730200-115732800 Enhancers Left Ventricle heart
26 chr5:115730200-115733000 Enhancers Right Ventricle heart
27 chr5:115730400-115731800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:115730400-115732400 Enhancers Fetal Kidney kidney
29 chr5:115730400-115733000 Enhancers Colon Smooth Muscle Colon
30 chr5:115730400-115769600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr5:115730600-115731000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr5:115730600-115731000 Enhancers Gastric stomach
33 chr5:115730600-115731800 Enhancers Brain Anterior Caudate brain
34 chr5:115730600-115732200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:115730600-115732400 Enhancers Brain Inferior Temporal Lobe brain
36 chr5:115730600-115732600 Enhancers Brain Cingulate Gyrus brain
37 chr5:115730600-115732600 Enhancers Brain Hippocampus Middle brain
38 chr5:115730600-115732600 Enhancers Brain Substantia Nigra brain
39 chr5:115730600-115732800 Enhancers Lung lung
40 chr5:115730600-115732800 Enhancers Ovary ovary
41 chr5:115730600-115732800 Enhancers Right Atrium heart

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