Variant report

Variant	rs552629291
Chromosome Location	chr3:118196517-118196518
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv460829	chr3:118195601-118229370	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv591349	chr3:118195601-118229370	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:118191800-118196800	Weak transcription	Hela-S3	cervix
2	chr3:118195800-118197400	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr3:118196200-118197200	Enhancers	GM12878-XiMat	blood
4	chr3:118196400-118196600	Enhancers	H9 Cell Line	embryonic stem cell
5	chr3:118196400-118198200	Enhancers	HUES6 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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