The 2.0 version of rSNPBase

Variant report

Variant rs552673839
Chromosome Location chr7:129395870-129395871
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:129364200-129397600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr7:129366800-129399400 Weak transcription Fetal Kidney kidney
3 chr7:129369600-129399400 Weak transcription Fetal Brain Male brain
4 chr7:129372200-129397800 Weak transcription NH-A brain
5 chr7:129372400-129398800 Weak transcription NHLF lung
6 chr7:129376600-129397200 Strong transcription Dnd41 blood
7 chr7:129379800-129400400 Weak transcription HSMM muscle
8 chr7:129380000-129397000 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr7:129380000-129406600 Weak transcription HSMMtube muscle
10 chr7:129380800-129397800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr7:129381800-129404200 Weak transcription HepG2 liver
12 chr7:129381800-129415600 Weak transcription Pancreas Pancrea
13 chr7:129382000-129398400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr7:129382400-129396200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr7:129382400-129408600 Weak transcription Right Atrium heart
16 chr7:129382400-129408800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr7:129382600-129407000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr7:129382800-129411400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr7:129383400-129398400 Weak transcription Brain Substantia Nigra brain
20 chr7:129383800-129396000 Weak transcription HUVEC blood vessel
21 chr7:129383800-129401000 Weak transcription Osteobl bone
22 chr7:129385400-129399200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr7:129386400-129397200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr7:129387200-129398400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr7:129387600-129399200 Weak transcription Fetal Lung lung
26 chr7:129387800-129398200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr7:129388600-129399000 Strong transcription Fetal Stomach stomach
28 chr7:129389600-129396600 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr7:129390000-129396000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr7:129390600-129397400 Weak transcription Placenta Amnion Placenta Amnion
31 chr7:129391000-129398000 Weak transcription GM12878-XiMat blood
32 chr7:129392000-129400000 Weak transcription Brain Cingulate Gyrus brain
33 chr7:129392200-129404000 Weak transcription K562 blood
34 chr7:129392400-129397200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr7:129392400-129404200 Weak transcription NHEK skin
36 chr7:129392400-129404400 Weak transcription HMEC breast
37 chr7:129393200-129397200 Strong transcription Primary B cells from peripheral blood blood
38 chr7:129393200-129397200 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr7:129393400-129397200 Strong transcription Primary T helper cells fromperipheralblood blood
40 chr7:129393600-129398400 Strong transcription Thymus Thymus
41 chr7:129393800-129397000 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr7:129393800-129397200 Strong transcription Primary T cells fromperipheralblood blood
43 chr7:129393800-129397200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr7:129393800-129398000 Strong transcription Fetal Intestine Small intestine
45 chr7:129394400-129396200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr7:129394400-129397000 Strong transcription Liver Liver
47 chr7:129394400-129397200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr7:129394400-129397200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr7:129394400-129397800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr7:129394400-129397800 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015