The 2.0 version of rSNPBase

Variant report

Variant rs552729020
Chromosome Location chr1:168436301-168436302
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:168433800-168443400 Weak transcription Liver Liver
2 chr1:168434000-168437000 Enhancers Primary hematopoietic stem cells short term culture blood
3 chr1:168434400-168443600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:168434600-168436600 Enhancers Fetal Muscle Leg muscle
5 chr1:168434800-168439200 Enhancers Dnd41 blood
6 chr1:168434800-168440800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:168435000-168436400 Enhancers HepG2 liver
8 chr1:168435000-168436600 Enhancers Primary T helper cells PMA-I stimulated --
9 chr1:168435000-168436800 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr1:168435000-168436800 Enhancers Primary T killer memory cells from peripheral blood blood
11 chr1:168435000-168436800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:168435000-168437000 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr1:168435000-168437600 Enhancers Fetal Intestine Small intestine
14 chr1:168435000-168437800 Enhancers Fetal Kidney kidney
15 chr1:168435000-168438400 Enhancers Primary hematopoietic stem cells blood
16 chr1:168435000-168438400 Enhancers Placenta Amnion Placenta Amnion
17 chr1:168435000-168439600 Enhancers HSMMtube muscle
18 chr1:168435000-168440400 Enhancers Primary T helper cells fromperipheralblood blood
19 chr1:168435000-168440600 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr1:168435000-168440600 Enhancers Rectal Smooth Muscle rectum
21 chr1:168435200-168436400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr1:168435200-168436400 Enhancers Primary Natural Killer cells fromperipheralblood blood
23 chr1:168435200-168436400 Enhancers Cortex derived primary cultured neurospheres brain
24 chr1:168435200-168436400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr1:168435200-168436400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:168435200-168436400 Enhancers Fetal Stomach stomach
27 chr1:168435200-168436400 Enhancers Psoas Muscle Psoas
28 chr1:168435200-168436400 Enhancers Rectal Mucosa Donor 31 rectum
29 chr1:168435200-168436400 Enhancers K562 blood
30 chr1:168435200-168436600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:168435200-168436600 Enhancers Duodenum Mucosa Duodenum
32 chr1:168435200-168436600 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr1:168435200-168436600 Enhancers Sigmoid Colon Sigmoid Colon
34 chr1:168435200-168436600 Enhancers A549 lung
35 chr1:168435200-168437000 Enhancers Primary T helper naive cells fromperipheralblood blood
36 chr1:168435200-168437400 Enhancers Fetal Intestine Large intestine
37 chr1:168435200-168437800 Enhancers Primary monocytes fromperipheralblood blood
38 chr1:168435200-168437800 Enhancers Colonic Mucosa Colon
39 chr1:168435200-168437800 Enhancers Rectal Mucosa Donor 29 rectum
40 chr1:168435200-168438200 Flanking Active TSS GM12878-XiMat blood
41 chr1:168435200-168439400 Enhancers Primary T cells fromperipheralblood blood
42 chr1:168435200-168439800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
43 chr1:168435200-168439800 Enhancers NHDF-Ad bronchial
44 chr1:168435200-168440000 Enhancers Primary T cells from cord blood blood
45 chr1:168435200-168440200 Enhancers Muscle Satellite Cultured Cells --
46 chr1:168435200-168440400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:168435200-168440400 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr1:168435200-168440400 Enhancers HSMM muscle
49 chr1:168435200-168440600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:168435200-168440600 Enhancers Colon Smooth Muscle Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015