The 2.0 version of rSNPBase

Variant report

Variant rs552743839
Chromosome Location chr4:79715582-79715583
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79699000-79717200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr4:79699400-79722600 Weak transcription Fetal Thymus thymus
3 chr4:79700200-79732800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr4:79700400-79718200 Weak transcription Duodenum Mucosa Duodenum
5 chr4:79701600-79719200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr4:79702000-79731200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr4:79703000-79720800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr4:79703200-79720800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr4:79703400-79720800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr4:79705600-79731200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr4:79706000-79720000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr4:79706000-79720200 Weak transcription Primary T cells from cord blood blood
13 chr4:79706000-79720200 Weak transcription NHEK skin
14 chr4:79706000-79720800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr4:79706200-79718000 Weak transcription Muscle Satellite Cultured Cells --
16 chr4:79706200-79718200 Weak transcription Fetal Lung lung
17 chr4:79706200-79722200 Weak transcription HSMM muscle
18 chr4:79706600-79722800 Weak transcription Brain Substantia Nigra brain
19 chr4:79707000-79721000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr4:79707400-79715800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr4:79707600-79721800 Weak transcription Fetal Muscle Leg muscle
22 chr4:79707800-79715800 Weak transcription Dnd41 blood
23 chr4:79707800-79716000 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr4:79707800-79720800 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr4:79707800-79720800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr4:79708200-79719000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr4:79708800-79719000 Weak transcription Right Atrium heart
28 chr4:79709000-79720800 Weak transcription NHLF lung
29 chr4:79709200-79717000 Weak transcription Brain Cingulate Gyrus brain
30 chr4:79709200-79723800 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr4:79709200-79731200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr4:79709400-79718200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr4:79709400-79724000 Weak transcription Fetal Intestine Small intestine
34 chr4:79709600-79716000 Weak transcription NHDF-Ad bronchial
35 chr4:79709600-79718400 Weak transcription Fetal Heart heart
36 chr4:79709600-79720600 Weak transcription Osteobl bone
37 chr4:79709600-79721400 Weak transcription Brain Anterior Caudate brain
38 chr4:79710000-79720200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr4:79710000-79720600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr4:79710400-79716000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr4:79710400-79725200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr4:79710800-79715800 Weak transcription Fetal Intestine Large intestine
43 chr4:79711000-79720800 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr4:79712800-79717800 Weak transcription Primary hematopoietic stem cells blood
45 chr4:79713000-79716000 Weak transcription Primary B cells from cord blood blood
46 chr4:79713600-79716400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr4:79713600-79717600 Weak transcription Primary monocytes fromperipheralblood blood
48 chr4:79713600-79717600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr4:79714000-79717800 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr4:79714400-79748400 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015