Variant report

Variant	rs552876529
Chromosome Location	chr10:19001852-19001853
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894915	chr10:18984571-19257664	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv550122	chr10:18993303-19017942	Enhancers Weak transcription	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3313986	chr10:18999408-19005520	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3313997	chr10:18999408-19005520	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:19001400-19002000	Enhancers	Fetal Intestine Small	intestine
2	chr10:19001400-19003000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr10:19001600-19002600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:19001600-19002600	Enhancers	Fetal Intestine Large	intestine
5	chr10:19001800-19002200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr10:19001800-19002200	Enhancers	NH-A	brain
7	chr10:19001800-19002600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr10:19001800-19002600	Enhancers	Muscle Satellite Cultured Cells	--
9	chr10:19001800-19002600	Enhancers	NHDF-Ad	bronchial
10	chr10:19001800-19002600	Enhancers	NHEK	skin
11	chr10:19001800-19002600	Enhancers	Osteobl	bone
12	chr10:19001800-19002800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr10:19001800-19002800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr10:19001800-19002800	Enhancers	Hela-S3	cervix
15	chr10:19001800-19002800	Enhancers	HMEC	breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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