Variant report

Variant rs552892652
Chromosome Location chr12:574875-574876
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:570200-579400 Weak transcription Lung lung
2 chr12:571000-590200 Weak transcription Esophagus oesophagus
3 chr12:571400-575600 Enhancers Stomach Mucosa stomach
4 chr12:571400-576600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr12:571400-577800 Weak transcription Gastric stomach
6 chr12:571600-579000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr12:572200-579200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr12:572400-582400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr12:572600-577800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr12:572800-582800 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr12:573200-575200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr12:573200-575600 Enhancers Left Ventricle heart
13 chr12:573200-584800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr12:573400-575400 Bivalent Enhancer Fetal Muscle Trunk muscle
15 chr12:573800-575400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
16 chr12:573800-575600 Enhancers Colonic Mucosa Colon
17 chr12:574000-575200 Enhancers Aorta Aorta
18 chr12:574000-575400 Enhancers Pancreas Pancrea
19 chr12:574000-575600 Enhancers Sigmoid Colon Sigmoid Colon
20 chr12:574200-575200 Enhancers Right Ventricle heart
21 chr12:574200-575400 Enhancers Right Atrium heart
22 chr12:574200-575600 Enhancers Fetal Intestine Small intestine
23 chr12:574400-575000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr12:574400-575200 Enhancers Rectal Mucosa Donor 31 rectum
25 chr12:574400-575400 Weak transcription Fetal Kidney kidney
26 chr12:574400-575600 Enhancers Fetal Muscle Leg muscle
27 chr12:574400-576600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr12:574400-577800 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr12:574400-577800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr12:574400-578000 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr12:574400-579000 Weak transcription Psoas Muscle Psoas
32 chr12:574400-579200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr12:574400-582800 Weak transcription H9 Cell Line embryonic stem cell
34 chr12:574600-575600 Enhancers Skeletal Muscle Female skeletal muscle
35 chr12:574600-576000 Enhancers Skeletal Muscle Male skeletal muscle
36 chr12:574600-576800 Weak transcription NHEK skin
37 chr12:574800-575200 Weak transcription HSMMtube muscle
38 chr12:574800-580000 Enhancers Fetal Heart heart

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