Variant report

Variant	rs552897791
Chromosome Location	chr7:118838007-118838008
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889098	chr7:118590050-118896639	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv1825159	chr7:118640865-118842361	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv889099	chr7:118709754-118868426	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv889100	chr7:118744450-119247571	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv889101	chr7:118778802-119177670	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv1023789	chr7:118803459-118854579	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv5925	chr7:118804702-118841585	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv608268	chr7:118829223-118838796	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	nsv608269	chr7:118829223-118839780	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	nsv608274	chr7:118831375-118838796	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
11	nsv608275	chr7:118831375-118845608	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	nsv608283	chr7:118831821-118838796	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	nsv608284	chr7:118831821-118839780	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	nsv608290	chr7:118832226-118838796	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	nsv608291	chr7:118832226-118850537	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
16	nsv608294	chr7:118832350-118838796	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
17	nsv608299	chr7:118832737-118838796	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
18	nsv608301	chr7:118832788-118838796	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
19	nsv608302	chr7:118832967-118838796	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:118836600-118838200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr7:118837200-118838200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr7:118837800-118838200	Enhancers	Dnd41	blood
4	chr7:118838000-118838400	Enhancers	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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