The 2.0 version of rSNPBase

Variant report

Variant rs552910084
Chromosome Location chr1:160653324-160653325
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160643400-160655200 Weak transcription Colonic Mucosa Colon
2 chr1:160644600-160655800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:160645800-160653600 Weak transcription Fetal Intestine Small intestine
4 chr1:160650400-160655600 Genic enhancers Fetal Thymus thymus
5 chr1:160650600-160656400 Genic enhancers Primary T cells fromperipheralblood blood
6 chr1:160650800-160655200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr1:160651000-160656400 Genic enhancers Primary B cells from peripheral blood blood
8 chr1:160651000-160656400 Genic enhancers Primary T helper cells fromperipheralblood blood
9 chr1:160651200-160655000 Genic enhancers Primary T helper naive cells fromperipheralblood blood
10 chr1:160651200-160655800 Genic enhancers Primary hematopoietic stem cells short term culture blood
11 chr1:160651400-160656000 Genic enhancers Primary B cells from cord blood blood
12 chr1:160651600-160653800 Genic enhancers GM12878-XiMat blood
13 chr1:160651600-160655400 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
14 chr1:160651600-160655400 Genic enhancers Dnd41 blood
15 chr1:160651600-160656400 Genic enhancers Primary T cells from cord blood blood
16 chr1:160651600-160656600 Genic enhancers Primary monocytes fromperipheralblood blood
17 chr1:160651800-160653400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:160651800-160653400 Enhancers Duodenum Mucosa Duodenum
19 chr1:160651800-160654200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:160651800-160654800 Strong transcription Thymus Thymus
21 chr1:160652200-160654200 Enhancers Small Intestine intestine
22 chr1:160652600-160653600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:160652600-160653800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:160652600-160654000 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
25 chr1:160652600-160655000 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
26 chr1:160652600-160655400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
27 chr1:160652600-160656000 Enhancers Rectal Mucosa Donor 29 rectum
28 chr1:160652800-160653600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
29 chr1:160652800-160654000 Enhancers Primary hematopoietic stem cells blood
30 chr1:160653000-160653400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
31 chr1:160653000-160653600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:160653000-160654200 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr1:160653200-160653800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr1:160653200-160653800 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
35 chr1:160653200-160653800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:160653200-160653800 Weak transcription Spleen Spleen
37 chr1:160653200-160654200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
38 chr1:160653200-160654400 Enhancers Primary neutrophils fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015