Variant report

Variant rs553045800
Chromosome Location chr12:57481903-57481904
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57479800-57482400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
2 chr12:57480000-57483800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr12:57480000-57484000 Active TSS ES-WA7 Cell Line embryonic stem cell
4 chr12:57480000-57484400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr12:57480000-57484400 Active TSS Aorta Aorta
6 chr12:57480000-57484400 Active TSS Left Ventricle heart
7 chr12:57480000-57484400 Active TSS Right Atrium heart
8 chr12:57480000-57485200 Active TSS Psoas Muscle Psoas
9 chr12:57480200-57482000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
10 chr12:57480200-57482400 Flanking Active TSS Primary monocytes fromperipheralblood blood
11 chr12:57480200-57482400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
12 chr12:57480200-57483800 Active TSS Sigmoid Colon Sigmoid Colon
13 chr12:57480200-57484000 Active TSS ES-I3 Cell Line embryonic stem cell
14 chr12:57480200-57484000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr12:57480200-57484000 Active TSS H9 Cell Line embryonic stem cell
16 chr12:57480200-57484000 Active TSS Pancreatic Islets Pancreatic Islet
17 chr12:57480200-57484400 Active TSS iPS-15b Cell Line embryonic stem cell
18 chr12:57480200-57484400 Active TSS iPS-20b Cell Line embryonic stem cell
19 chr12:57480200-57484400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
20 chr12:57480200-57484400 Active TSS Brain Anterior Caudate brain
21 chr12:57480200-57484400 Active TSS Lung lung
22 chr12:57480200-57484600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr12:57480400-57482000 Active TSS Breast Myoepithelial Primary Cells Breast
24 chr12:57480400-57482000 Active TSS Brain Hippocampus Middle brain
25 chr12:57480400-57482000 Active TSS Placenta Amnion Placenta Amnion
26 chr12:57480400-57483600 Active TSS Spleen Spleen
27 chr12:57480400-57483800 Active TSS Brain Cingulate Gyrus brain
28 chr12:57480400-57483800 Active TSS Small Intestine intestine
29 chr12:57480400-57484400 Active TSS HUES64 Cell Line embryonic stem cell
30 chr12:57480400-57484400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
31 chr12:57480400-57484400 Active TSS Brain Inferior Temporal Lobe brain
32 chr12:57480400-57484400 Active TSS Duodenum Smooth Muscle Duodenum
33 chr12:57480400-57484400 Active TSS Esophagus oesophagus
34 chr12:57480400-57484400 Active TSS Right Ventricle heart
35 chr12:57480400-57484600 Active TSS HUES48 Cell Line embryonic stem cell
36 chr12:57480400-57485000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr12:57480600-57482000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr12:57480600-57482000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
39 chr12:57480600-57483600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
40 chr12:57480600-57483800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
41 chr12:57480600-57484000 Active TSS Primary T killer memory cells from peripheral blood blood
42 chr12:57480600-57484200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr12:57480600-57484400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr12:57480600-57484400 Active TSS Colon Smooth Muscle Colon
45 chr12:57480600-57484400 Active TSS Thymus Thymus
46 chr12:57480600-57484600 Active TSS Ovary ovary
47 chr12:57480800-57482000 Active TSS Primary T cells from cord blood blood
48 chr12:57480800-57483600 Active TSS Fetal Stomach stomach
49 chr12:57480800-57483800 Active TSS Gastric stomach
50 chr12:57480800-57484800 Active TSS iPS-18 Cell Line embryonic stem cell

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