Variant report

Variant	rs553049113
Chromosome Location	chr13:86373862-86373863
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1037563	chr13:85830511-86414012	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3437679	chr13:86373151-86376849	Flanking Active TSS Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:86373200-86374000	Enhancers	Hela-S3	cervix
2	chr13:86373600-86374000	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr13:86373600-86374000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr13:86373600-86374000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr13:86373600-86374000	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr13:86373600-86374000	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr13:86373600-86374000	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr13:86373600-86374000	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr13:86373600-86374000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr13:86373600-86374000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr13:86373600-86374000	Enhancers	NHEK	skin
12	chr13:86373600-86374600	Enhancers	HMEC	breast
13	chr13:86373800-86374000	Enhancers	Fetal Kidney	kidney
14	chr13:86373800-86374000	Enhancers	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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