The 2.0 version of rSNPBase

Variant report

Variant rs553080116
Chromosome Location chr7:111945260-111945261
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111903400-111949200 Weak transcription Fetal Intestine Small intestine
2 chr7:111913200-111965200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr7:111913600-111949600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr7:111918000-111963000 Weak transcription Aorta Aorta
5 chr7:111921400-111961800 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr7:111922000-111949800 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr7:111922400-111949800 Weak transcription Ovary ovary
8 chr7:111923600-111964600 Weak transcription Esophagus oesophagus
9 chr7:111923600-111964800 Weak transcription Gastric stomach
10 chr7:111926200-111948000 Weak transcription Spleen Spleen
11 chr7:111926200-111979600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr7:111926600-111982200 Weak transcription Right Ventricle heart
13 chr7:111926800-111949000 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr7:111926800-111949800 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr7:111926800-111949800 Weak transcription Duodenum Mucosa Duodenum
16 chr7:111926800-111962000 Weak transcription Fetal Brain Female brain
17 chr7:111926800-111964800 Weak transcription Lung lung
18 chr7:111927200-111965000 Weak transcription Brain Anterior Caudate brain
19 chr7:111927400-111945800 Weak transcription Primary T cells fromperipheralblood blood
20 chr7:111927400-111964800 Weak transcription Fetal Stomach stomach
21 chr7:111928600-111947000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr7:111928600-111978000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr7:111928800-111946600 Weak transcription Brain Substantia Nigra brain
24 chr7:111928800-111949800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr7:111928800-111949800 Weak transcription Fetal Muscle Leg muscle
26 chr7:111928800-111950000 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr7:111928800-111961000 Weak transcription Placenta Placenta
28 chr7:111929000-111947000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr7:111929000-111948800 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr7:111929000-111949000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr7:111929000-111949600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr7:111929000-111949800 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr7:111929000-111958800 Weak transcription Fetal Thymus thymus
34 chr7:111929000-111959000 Weak transcription Fetal Intestine Large intestine
35 chr7:111929200-111949000 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr7:111929600-111949000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr7:111930000-111949800 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr7:111930200-111961800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr7:111930600-111959000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr7:111930800-111947200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr7:111930800-111949200 Weak transcription NHEK skin
42 chr7:111930800-111965200 Weak transcription Muscle Satellite Cultured Cells --
43 chr7:111931000-111949200 Weak transcription Primary B cells from peripheral blood blood
44 chr7:111931000-111949200 Weak transcription HMEC breast
45 chr7:111931000-111949200 Weak transcription HSMM muscle
46 chr7:111931000-111949400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr7:111931000-111949800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr7:111931000-111981000 Weak transcription HSMMtube muscle
49 chr7:111931400-111947400 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr7:111932400-111948600 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015