Variant report

Variant	rs553134351
Chromosome Location	chr2:184795134-184795135
allele	-/TCTT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002074	chr2:184697897-184955330	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv875487	chr2:184737282-185186670	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1012010	chr2:184785154-184802429	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
4	nsv1012295	chr2:184789448-184802429	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	lncRNA	n/a	inside rSNPs	n/a
5	esv2763332	chr2:184789460-184815561	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	inside rSNPs	n/a
6	nsv1013842	chr2:184790463-184802429	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription	lncRNA	n/a	inside rSNPs	n/a
7	nsv1006250	chr2:184793800-184808782	Enhancers ZNF genes & repeats Weak transcription	lncRNA	n/a	inside rSNPs	n/a
8	nsv583955	chr2:184793851-184800613	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	n/a
9	nsv583956	chr2:184793851-184801219	Weak transcription Enhancers	lncRNA	n/a	inside rSNPs	n/a
10	nsv583957	chr2:184793851-184802609	Enhancers Weak transcription ZNF genes & repeats	lncRNA	n/a	inside rSNPs	n/a
11	nsv583958	chr2:184793851-184808873	Weak transcription ZNF genes & repeats Enhancers	lncRNA	n/a	inside rSNPs	n/a
12	nsv437602	chr2:184794400-184806525	Enhancers Weak transcription ZNF genes & repeats	lncRNA	n/a	inside rSNPs	n/a
13	nsv1004839	chr2:184794400-184811658	Enhancers Weak transcription ZNF genes & repeats	lncRNA	n/a	inside rSNPs	n/a
14	nsv441796	chr2:184794514-184802441	Weak transcription ZNF genes & repeats Enhancers	lncRNA	n/a	inside rSNPs	n/a
15	nsv514107	chr2:184794523-184801643	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:184793000-184809000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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