Variant report

Variant rs553161871
Chromosome Location chr22:23411817-23411818
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23411200-23412000 Bivalent Enhancer Fetal Stomach stomach
2 chr22:23411200-23412000 Enhancers Gastric stomach
3 chr22:23411200-23412000 Enhancers Spleen Spleen
4 chr22:23411200-23412400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
5 chr22:23411400-23412000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
6 chr22:23411400-23412000 Flanking Active TSS Brain Anterior Caudate brain
7 chr22:23411400-23412000 Enhancers Lung lung
8 chr22:23411400-23412200 Flanking Active TSS Brain Hippocampus Middle brain
9 chr22:23411400-23412200 Flanking Active TSS Fetal Brain Male brain
10 chr22:23411400-23412200 Flanking Active TSS Stomach Smooth Muscle stomach
11 chr22:23411400-23412200 Flanking Bivalent TSS/Enh HepG2 liver
12 chr22:23411600-23412000 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr22:23411600-23412000 Enhancers Primary B cells from peripheral blood blood
14 chr22:23411600-23412000 Bivalent Enhancer Primary T cells fromperipheralblood blood
15 chr22:23411600-23412000 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr22:23411600-23412000 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr22:23411600-23412000 Flanking Active TSS Brain Cingulate Gyrus brain
18 chr22:23411600-23412000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr22:23411600-23412000 Enhancers Fetal Lung lung
20 chr22:23411600-23412000 Enhancers Stomach Mucosa stomach
21 chr22:23411600-23412000 Flanking Active TSS A549 lung
22 chr22:23411600-23412200 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
23 chr22:23411600-23412200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
24 chr22:23411600-23412200 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
25 chr22:23411600-23412200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
26 chr22:23411600-23412200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
27 chr22:23411600-23412200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
28 chr22:23411600-23412200 Flanking Active TSS Brain Germinal Matrix brain
29 chr22:23411600-23412200 Flanking Active TSS Brain Inferior Temporal Lobe brain
30 chr22:23411600-23412200 Flanking Active TSS Right Ventricle heart
31 chr22:23411600-23412200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
32 chr22:23411600-23412400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
33 chr22:23411600-23412400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
34 chr22:23411600-23413200 Enhancers Fetal Heart heart
35 chr22:23411600-23413600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
36 chr22:23411600-23413600 Active TSS Colon Smooth Muscle Colon
37 chr22:23411600-23413800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
38 chr22:23411800-23412000 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr22:23411800-23412000 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr22:23411800-23412000 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
41 chr22:23411800-23412000 Flanking Bivalent TSS/Enh iPS DF 6.9 Cell Line embryonic stem cell
42 chr22:23411800-23412000 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
43 chr22:23411800-23412000 Flanking Bivalent TSS/Enh Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr22:23411800-23412000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr22:23411800-23412000 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
46 chr22:23411800-23412000 Enhancers Primary B cells from cord blood blood
47 chr22:23411800-23412000 Enhancers Primary hematopoietic stem cells blood
48 chr22:23411800-23412000 Active TSS Primary T helper memory cells from peripheral blood 1 blood
49 chr22:23411800-23412000 Enhancers Primary T helper 17 cells PMA-I stimulated --
50 chr22:23411800-23412000 Enhancers Primary T helper cells fromperipheralblood blood

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