Variant report

Variant rs553239470
Chromosome Location chr3:156430387-156430388
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:156394000-156436000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:156395600-156438600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr3:156396600-156441000 Weak transcription Lung lung
4 chr3:156416000-156437000 Weak transcription Pancreas Pancrea
5 chr3:156416000-156443000 Weak transcription Aorta Aorta
6 chr3:156417000-156430400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr3:156419800-156433800 Weak transcription Esophagus oesophagus
8 chr3:156422800-156430400 Weak transcription Brain Cingulate Gyrus brain
9 chr3:156422800-156431400 Weak transcription Fetal Kidney kidney
10 chr3:156422800-156436400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr3:156422800-156436400 Weak transcription Brain Inferior Temporal Lobe brain
12 chr3:156422800-156436400 Weak transcription Placenta Placenta
13 chr3:156422800-156437600 Weak transcription Thymus Thymus
14 chr3:156422800-156438600 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr3:156422800-156442800 Weak transcription Psoas Muscle Psoas
16 chr3:156423000-156436000 Weak transcription Stomach Smooth Muscle stomach
17 chr3:156423000-156443200 Weak transcription Small Intestine intestine
18 chr3:156423000-156445800 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr3:156423600-156431600 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr3:156424000-156440800 Weak transcription NHLF lung
21 chr3:156424200-156432600 Weak transcription Brain Hippocampus Middle brain
22 chr3:156424200-156436600 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr3:156424200-156443000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr3:156424200-156445800 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr3:156424400-156430800 Weak transcription Brain Anterior Caudate brain
26 chr3:156424400-156433400 Weak transcription Primary T cells from cord blood blood
27 chr3:156424400-156434600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr3:156424400-156435000 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr3:156424400-156436600 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr3:156424400-156436600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr3:156424400-156438400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr3:156424400-156438400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr3:156424400-156438600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr3:156424400-156438600 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr3:156424400-156438600 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr3:156424800-156438400 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr3:156425400-156434800 Weak transcription Adipose Nuclei Adipose
38 chr3:156425600-156430600 Weak transcription Primary T cells fromperipheralblood blood
39 chr3:156425600-156432800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr3:156425600-156435000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr3:156425800-156430400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr3:156425800-156432800 Weak transcription Fetal Intestine Large intestine
43 chr3:156426000-156431800 Weak transcription HSMMtube muscle
44 chr3:156426000-156435000 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr3:156426600-156446000 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr3:156427400-156434400 Weak transcription Fetal Thymus thymus
47 chr3:156427600-156435400 Weak transcription Primary monocytes fromperipheralblood blood
48 chr3:156428200-156438400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr3:156428400-156439200 Weak transcription K562 blood
50 chr3:156428600-156432000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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