Variant report

Variant	rs553312129
Chromosome Location	chr4:106987517-106987518
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3414280	chr4:106987397-107017178	ZNF genes & repeats Weak transcription Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3419151	chr4:106987397-107020894	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3390090	chr4:106987509-106987725	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:106967800-106994600	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr4:106972400-106997000	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr4:106983800-106994800	Weak transcription	Fetal Kidney	kidney
4	chr4:106983800-106995000	Weak transcription	Rectal Smooth Muscle	rectum
5	chr4:106984000-106995000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr4:106984000-107010200	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr4:106984600-106998200	Weak transcription	Fetal Heart	heart
8	chr4:106985000-107011400	Weak transcription	HepG2	liver
9	chr4:106986800-107002400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr4:106987000-106995800	Weak transcription	Pancreatic Islets	Pancreatic Islet

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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