Variant report

Variant	rs553397763
Chromosome Location	chr1:75595242-75595243
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv871743	chr1:75235082-75714554	Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv3368999	chr1:75524762-75933220	Bivalent/Poised TSS Strong transcription Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv3395673	chr1:75595134-75595311	Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:75594000-75595400	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
2	chr1:75595200-75595400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
3	chr1:75595200-75595600	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
4	chr1:75595200-75595600	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
5	chr1:75595200-75595600	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
6	chr1:75595200-75596000	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
7	chr1:75595200-75597400	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
8	chr1:75595200-75597400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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