Variant report

Variant rs553613077
Chromosome Location chr3:195635806-195635807
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195632600-195637200 Active TSS Pancreatic Islets Pancreatic Islet
2 chr3:195633000-195636000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr3:195633000-195636000 Flanking Active TSS Dnd41 blood
4 chr3:195633200-195636200 Flanking Active TSS Primary hematopoietic stem cells blood
5 chr3:195633600-195636000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
6 chr3:195633600-195636000 Flanking Active TSS Adipose Nuclei Adipose
7 chr3:195633600-195636000 Flanking Active TSS Stomach Smooth Muscle stomach
8 chr3:195634000-195636000 Flanking Active TSS Colonic Mucosa Colon
9 chr3:195634200-195636000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
10 chr3:195634400-195636800 Active TSS Small Intestine intestine
11 chr3:195634600-195637200 Active TSS Psoas Muscle Psoas
12 chr3:195634800-195636800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr3:195635000-195636800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr3:195635000-195636800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
15 chr3:195635000-195636800 Active TSS Thymus Thymus
16 chr3:195635000-195637000 Active TSS A549 lung
17 chr3:195635000-195637200 Active TSS Fetal Kidney kidney
18 chr3:195635200-195636000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr3:195635200-195636800 Active TSS Primary T cells from cord blood blood
20 chr3:195635200-195636800 Active TSS Brain Hippocampus Middle brain
21 chr3:195635200-195636800 Active TSS Brain Substantia Nigra brain
22 chr3:195635200-195637000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr3:195635200-195637000 Active TSS HUES48 Cell Line embryonic stem cell
24 chr3:195635200-195637000 Active TSS Brain Cingulate Gyrus brain
25 chr3:195635200-195637200 Active TSS H9 Cell Line embryonic stem cell
26 chr3:195635200-195637200 Active TSS Aorta Aorta
27 chr3:195635400-195636000 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
28 chr3:195635400-195636000 Active TSS Primary monocytes fromperipheralblood blood
29 chr3:195635400-195636000 Active TSS Primary T killer memory cells from peripheral blood blood
30 chr3:195635400-195636800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr3:195635400-195636800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
32 chr3:195635400-195636800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
33 chr3:195635400-195636800 Active TSS Breast Myoepithelial Primary Cells Breast
34 chr3:195635400-195636800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr3:195635400-195636800 Active TSS Primary neutrophils fromperipheralblood blood
36 chr3:195635400-195636800 Active TSS Primary B cells from peripheral blood blood
37 chr3:195635400-195636800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
38 chr3:195635400-195636800 Active TSS Primary T helper naive cells fromperipheralblood blood
39 chr3:195635400-195636800 Active TSS Primary T regulatory cells fromperipheralblood blood
40 chr3:195635400-195636800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
41 chr3:195635400-195636800 Active TSS Primary T killer naive cells fromperipheralblood blood
42 chr3:195635400-195636800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
43 chr3:195635400-195636800 Active TSS Brain Angular Gyrus brain
44 chr3:195635400-195636800 Active TSS Brain Anterior Caudate brain
45 chr3:195635400-195636800 Active TSS Brain Inferior Temporal Lobe brain
46 chr3:195635400-195636800 Active TSS Left Ventricle heart
47 chr3:195635400-195636800 Active TSS GM12878-XiMat blood
48 chr3:195635400-195636800 Active TSS HepG2 liver
49 chr3:195635400-195636800 Active TSS HMEC breast
50 chr3:195635400-195636800 Active TSS HSMM muscle

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