The 2.0 version of rSNPBase

Variant report

Variant rs553635829
Chromosome Location chr3:136386808-136386809
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136357800-136387400 Weak transcription Fetal Thymus thymus
2 chr3:136365000-136396400 Weak transcription Gastric stomach
3 chr3:136374400-136387400 Weak transcription Primary hematopoietic stem cells blood
4 chr3:136374400-136390000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr3:136374600-136387400 Weak transcription Primary T cells from cord blood blood
6 chr3:136374600-136389400 Weak transcription Fetal Intestine Small intestine
7 chr3:136374800-136390000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr3:136375600-136390400 Weak transcription Dnd41 blood
9 chr3:136376400-136387400 Weak transcription Primary B cells from peripheral blood blood
10 chr3:136376600-136392200 Weak transcription Placenta Placenta
11 chr3:136376800-136390400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:136377000-136387600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr3:136377000-136389400 Weak transcription NHEK skin
14 chr3:136377000-136390400 Weak transcription Right Ventricle heart
15 chr3:136378600-136390400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr3:136378600-136390400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr3:136378600-136391400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr3:136378600-136393600 Weak transcription Fetal Lung lung
19 chr3:136378600-136394000 Weak transcription Adipose Nuclei Adipose
20 chr3:136378800-136390600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr3:136379200-136394000 Weak transcription Brain Inferior Temporal Lobe brain
22 chr3:136379600-136391800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr3:136380800-136391600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr3:136381600-136390400 Weak transcription Spleen Spleen
25 chr3:136381600-136392400 Weak transcription Small Intestine intestine
26 chr3:136381800-136387400 Weak transcription Primary B cells from cord blood blood
27 chr3:136381800-136388800 Weak transcription Fetal Stomach stomach
28 chr3:136381800-136410800 Weak transcription Psoas Muscle Psoas
29 chr3:136382600-136394200 Weak transcription Fetal Heart heart
30 chr3:136383000-136390400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr3:136383000-136393200 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr3:136383400-136394800 Weak transcription Ovary ovary
33 chr3:136383600-136391000 Weak transcription HepG2 liver
34 chr3:136383600-136395800 Weak transcription Colon Smooth Muscle Colon
35 chr3:136383800-136391400 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr3:136383800-136391800 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr3:136384000-136392400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr3:136384200-136387600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr3:136384200-136390200 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr3:136384200-136390600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr3:136384200-136390800 Weak transcription HSMM muscle
42 chr3:136384200-136391400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr3:136384200-136392000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr3:136384200-136392000 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr3:136384200-136393200 Weak transcription Brain Anterior Caudate brain
46 chr3:136384200-136393800 Weak transcription Brain Substantia Nigra brain
47 chr3:136384400-136387400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr3:136384400-136387800 Weak transcription GM12878-XiMat blood
49 chr3:136384400-136388200 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr3:136384400-136391400 Weak transcription Primary T helper cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015