Variant report

Variant	rs553636980
Chromosome Location	chr9:94351498-94351499
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3402084	chr9:94349581-94351829	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3482523	chr9:94350525-94352475	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3482524	chr9:94350583-94352422	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3482525	chr9:94350603-94352329	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94351000-94352200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr9:94351200-94351800	Enhancers	Left Ventricle	heart
3	chr9:94351200-94352000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr9:94351200-94352000	Enhancers	Pancreas	Pancrea
5	chr9:94351200-94352200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr9:94351200-94352200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr9:94351200-94352200	Enhancers	Ovary	ovary
8	chr9:94351200-94352200	Enhancers	Spleen	Spleen
9	chr9:94351200-94352200	Enhancers	GM12878-XiMat	blood
10	chr9:94351200-94352400	Enhancers	Brain Germinal Matrix	brain
11	chr9:94351200-94352800	Enhancers	Fetal Stomach	stomach
12	chr9:94351400-94351600	Enhancers	Stomach Smooth Muscle	stomach
13	chr9:94351400-94351800	Enhancers	Fetal Lung	lung
14	chr9:94351400-94352000	Enhancers	Fetal Muscle Leg	muscle
15	chr9:94351400-94352200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr9:94351400-94352200	Enhancers	Fetal Thymus	thymus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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