Variant report

Variant rs553663561
Chromosome Location chr22:22301031-22301032
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22293000-22301400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr22:22293000-22306200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr22:22293000-22306400 Weak transcription Small Intestine intestine
4 chr22:22293200-22301400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr22:22293200-22301600 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr22:22293200-22301600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
7 chr22:22293200-22301800 Genic enhancers Spleen Spleen
8 chr22:22293200-22305400 Genic enhancers Fetal Muscle Trunk muscle
9 chr22:22293200-22306000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr22:22293400-22302600 Genic enhancers Fetal Muscle Leg muscle
11 chr22:22293600-22301600 Strong transcription Fetal Intestine Small intestine
12 chr22:22297200-22301400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr22:22297200-22302400 Genic enhancers Primary hematopoietic stem cells short term culture blood
14 chr22:22297200-22306000 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr22:22297200-22306000 Weak transcription GM12878-XiMat blood
16 chr22:22297400-22301200 Weak transcription H1 Cell Line embryonic stem cell
17 chr22:22297600-22301200 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr22:22297800-22301200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chr22:22297800-22304400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
20 chr22:22298200-22301400 Weak transcription Stomach Mucosa stomach
21 chr22:22298800-22301200 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr22:22298800-22301200 Weak transcription Fetal Heart heart
23 chr22:22299000-22301200 Strong transcription NHLF lung
24 chr22:22299200-22301200 Strong transcription Primary monocytes fromperipheralblood blood
25 chr22:22299600-22301200 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr22:22299600-22301400 Weak transcription NHDF-Ad bronchial
27 chr22:22299600-22303800 Weak transcription Primary B cells from cord blood blood
28 chr22:22299600-22306000 Weak transcription Hela-S3 cervix
29 chr22:22299800-22301200 Weak transcription NH-A brain
30 chr22:22299800-22301400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr22:22299800-22301800 Enhancers Psoas Muscle Psoas
32 chr22:22299800-22306000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr22:22300000-22301200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr22:22300000-22301600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr22:22300000-22301800 Weak transcription Fetal Kidney kidney
36 chr22:22300000-22302400 Weak transcription Fetal Brain Male brain
37 chr22:22300000-22305200 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr22:22300200-22301200 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr22:22300200-22301400 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr22:22300200-22301400 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr22:22300200-22301400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr22:22300200-22301400 Weak transcription Fetal Lung lung
43 chr22:22300200-22301800 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr22:22300200-22301800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr22:22300200-22301800 Weak transcription Brain Hippocampus Middle brain
46 chr22:22300200-22302000 Weak transcription Brain Substantia Nigra brain
47 chr22:22300200-22304400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
48 chr22:22300200-22304800 Enhancers Skeletal Muscle Female skeletal muscle
49 chr22:22300200-22305600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr22:22300200-22306000 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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