Variant report

Variant	rs553735148
Chromosome Location	chr5:68135308-68135309
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv328643	chr5:68134744-68139215	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68133000-68142800	Weak transcription	Aorta	Aorta
2	chr5:68133600-68136800	Enhancers	Placenta Amnion	Placenta Amnion
3	chr5:68134000-68135600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr5:68134000-68135600	Enhancers	NHDF-Ad	bronchial
5	chr5:68134200-68135400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr5:68134200-68135400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr5:68134200-68135400	Enhancers	Placenta	Placenta
8	chr5:68134200-68135400	Enhancers	HMEC	breast
9	chr5:68134200-68135600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr5:68134200-68135800	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr5:68134800-68135400	Enhancers	NHEK	skin
12	chr5:68134800-68135800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr5:68134800-68136000	Enhancers	Primary neutrophils fromperipheralblood	blood
14	chr5:68135200-68135400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr5:68135200-68135600	Enhancers	Adipose Nuclei	Adipose
16	chr5:68135200-68139200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links