Variant report

Variant	rs553736263
Chromosome Location	chr21:17155359-17155360
allele	-/AGAT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:17104010..17105531-chr21:17155055..17156862,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1815433	chr21:17106192-17167353	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv834050	chr21:17146090-17348951	Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	nsv1063035	chr21:17154222-17224344	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:17130800-17156800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr21:17145800-17156400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr21:17145800-17166600	Weak transcription	Psoas Muscle	Psoas
4	chr21:17148000-17160200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr21:17151600-17160600	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr21:17151800-17191000	Weak transcription	NH-A	brain
7	chr21:17152200-17155600	Strong transcription	HUES64 Cell Line	embryonic stem cell
8	chr21:17152200-17156400	Weak transcription	Brain Substantia Nigra	brain
9	chr21:17152400-17155400	Strong transcription	HUES6 Cell Line	embryonic stem cell
10	chr21:17152800-17155400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr21:17152800-17155600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
12	chr21:17152800-17155600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
13	chr21:17152800-17155800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
14	chr21:17152800-17155800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr21:17152800-17155800	Strong transcription	Primary T cells fromperipheralblood	blood
16	chr21:17152800-17155800	Strong transcription	A549	lung
17	chr21:17152800-17155800	Strong transcription	HSMM	muscle
18	chr21:17153000-17155400	Strong transcription	HUES48 Cell Line	embryonic stem cell
19	chr21:17153000-17155400	Strong transcription	Primary B cells from peripheral blood	blood
20	chr21:17153000-17155400	Strong transcription	Fetal Muscle Trunk	muscle
21	chr21:17153000-17155800	Strong transcription	Primary T helper cells fromperipheralblood	blood
22	chr21:17153200-17155600	Strong transcription	Fetal Lung	lung
23	chr21:17153200-17155800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr21:17153200-17155800	ZNF genes & repeats	GM12878-XiMat	blood
25	chr21:17153200-17155800	Strong transcription	NHEK	skin
26	chr21:17153200-17156200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr21:17153400-17155800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
28	chr21:17153600-17155400	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
29	chr21:17153600-17155400	Strong transcription	HSMMtube	muscle
30	chr21:17154200-17155400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr21:17154400-17155600	ZNF genes & repeats	Primary T cells from cord blood	blood
32	chr21:17154400-17155800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr21:17154400-17155800	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
34	chr21:17154400-17155800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr21:17154400-17155800	ZNF genes & repeats	Fetal Muscle Leg	muscle
36	chr21:17154400-17156400	Weak transcription	Brain Angular Gyrus	brain
37	chr21:17154600-17156400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
38	chr21:17154800-17155600	ZNF genes & repeats	Fetal Brain Female	brain
39	chr21:17154800-17156000	ZNF genes & repeats	Primary B cells from cord blood	blood
40	chr21:17154800-17156000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr21:17154800-17156400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
42	chr21:17154800-17159600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
43	chr21:17154800-17161000	Weak transcription	Stomach Mucosa	stomach
44	chr21:17155000-17155400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr21:17155000-17155400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr21:17155000-17155400	Genic enhancers	Primary T helper naive cells from peripheral blood	blood
47	chr21:17155000-17155800	Strong transcription	Monocytes-CD14+_RO01746	blood
48	chr21:17155000-17156600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
49	chr21:17155000-17156600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
50	chr21:17155000-17156800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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