Variant report

Variant	rs553748122
Chromosome Location	chr12:26330302-26330303
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv648	chr12:26330291-26375186	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26328200-26331200	Enhancers	Rectal Mucosa Donor 31	rectum
2	chr12:26329200-26331000	Enhancers	Fetal Intestine Small	intestine
3	chr12:26329200-26331200	Enhancers	Fetal Intestine Large	intestine
4	chr12:26329400-26330600	Enhancers	Stomach Mucosa	stomach
5	chr12:26329400-26331200	Enhancers	Small Intestine	intestine
6	chr12:26329800-26331000	Enhancers	Duodenum Mucosa	Duodenum
7	chr12:26330200-26330400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
8	chr12:26330200-26330600	Enhancers	GM12878-XiMat	blood
9	chr12:26330200-26330600	Enhancers	HMEC	breast
10	chr12:26330200-26330800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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