Variant report

Variant rs553769507
Chromosome Location chr11:64059487-64059488
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:64058200-64060200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
2 chr11:64058200-64061600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
3 chr11:64058400-64060000 Bivalent/Poised TSS Fetal Brain Female brain
4 chr11:64058400-64060200 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
5 chr11:64058400-64060400 Bivalent Enhancer Fetal Muscle Trunk muscle
6 chr11:64058400-64060600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
7 chr11:64058600-64059800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
8 chr11:64058600-64059800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
9 chr11:64058600-64060200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
10 chr11:64058600-64060200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
11 chr11:64058600-64060200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
12 chr11:64058600-64060400 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
13 chr11:64058600-64063200 Weak transcription Hela-S3 cervix
14 chr11:64058800-64060000 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
15 chr11:64058800-64060000 Bivalent Enhancer Primary B cells from cord blood blood
16 chr11:64058800-64060000 Bivalent Enhancer Fetal Muscle Leg muscle
17 chr11:64058800-64060000 Flanking Active TSS Right Ventricle heart
18 chr11:64058800-64060000 Enhancers Spleen Spleen
19 chr11:64058800-64060200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
20 chr11:64058800-64060200 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
21 chr11:64058800-64060200 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
22 chr11:64058800-64060200 Enhancers Liver Liver
23 chr11:64058800-64060200 Enhancers Pancreas Pancrea
24 chr11:64058800-64060400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr11:64058800-64060400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr11:64058800-64060400 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
27 chr11:64058800-64060400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr11:64058800-64060400 Active TSS Brain Angular Gyrus brain
29 chr11:64058800-64060400 Active TSS Brain Anterior Caudate brain
30 chr11:64058800-64060400 Active TSS Brain Inferior Temporal Lobe brain
31 chr11:64059000-64059800 Active TSS Brain Cingulate Gyrus brain
32 chr11:64059000-64059800 Bivalent/Poised TSS Brain Germinal Matrix brain
33 chr11:64059000-64059800 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
34 chr11:64059000-64059800 Flanking Bivalent TSS/Enh Psoas Muscle Psoas
35 chr11:64059000-64060000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr11:64059000-64060000 Active TSS Breast Myoepithelial Primary Cells Breast
37 chr11:64059000-64060200 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
38 chr11:64059000-64060200 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
39 chr11:64059000-64060200 Bivalent/Poised TSS HepG2 liver
40 chr11:64059000-64060400 Bivalent Enhancer Placenta Placenta
41 chr11:64059200-64059600 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr11:64059200-64059600 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr11:64059200-64059600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
44 chr11:64059200-64059600 Flanking Bivalent TSS/Enh Primary T helper memory cells from peripheral blood 1 blood
45 chr11:64059200-64059600 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
46 chr11:64059200-64059600 Bivalent Enhancer Stomach Mucosa stomach
47 chr11:64059200-64059600 Flanking Active TSS Stomach Smooth Muscle stomach
48 chr11:64059200-64059800 Active TSS Primary T helper 17 cells PMA-I stimulated --
49 chr11:64059200-64059800 Flanking Bivalent TSS/Enh Esophagus oesophagus
50 chr11:64059200-64059800 Bivalent Enhancer Sigmoid Colon Sigmoid Colon

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