Variant report
| Variant | rs553813908 |
|---|---|
| Chromosome Location | chr11:34625319-34625320 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:34608400-34643600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr11:34620000-34626600 | Enhancers | NHEK | skin |
| 3 | chr11:34620600-34628400 | Enhancers | Fetal Intestine Small | intestine |
| 4 | chr11:34620600-34628600 | Enhancers | Fetal Intestine Large | intestine |
| 5 | chr11:34620800-34625800 | Enhancers | Pancreas | Pancrea |
| 6 | chr11:34621800-34626600 | Weak transcription | Small Intestine | intestine |
| 7 | chr11:34622600-34626000 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 8 | chr11:34622600-34626600 | Weak transcription | HMEC | breast |
| 9 | chr11:34622800-34627200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 10 | chr11:34623000-34625600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 11 | chr11:34623000-34627000 | Enhancers | Stomach Mucosa | stomach |
| 12 | chr11:34623000-34627200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 13 | chr11:34623000-34627600 | Weak transcription | Esophagus | oesophagus |
| 14 | chr11:34623000-34628000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 15 | chr11:34623200-34626600 | Weak transcription | HSMMtube | muscle |
| 16 | chr11:34623200-34627200 | Weak transcription | NHLF | lung |
| 17 | chr11:34623400-34628600 | Enhancers | A549 | lung |
| 18 | chr11:34623400-34628600 | Enhancers | HepG2 | liver |
| 19 | chr11:34623400-34631200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 20 | chr11:34624200-34633800 | Weak transcription | Lung | lung |
| 21 | chr11:34624400-34625400 | Flanking Active TSS | K562 | blood |
| 22 | chr11:34624600-34628400 | Enhancers | Hela-S3 | cervix |
| 23 | chr11:34624800-34625600 | Weak transcription | Colonic Mucosa | Colon |
| 24 | chr11:34624800-34626600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 25 | chr11:34624800-34628200 | Enhancers | Duodenum Mucosa | Duodenum |
| 26 | chr11:34624800-34630800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 27 | chr11:34625000-34626000 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 28 | chr11:34625200-34625400 | Enhancers | Fetal Lung | lung |
| 29 | chr11:34625200-34625400 | Enhancers | Gastric | stomach |
| 30 | chr11:34625200-34625400 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 31 | chr11:34625200-34626000 | Enhancers | Placenta | Placenta |
| 32 | chr11:34625200-34628200 | Enhancers | Rectal Mucosa Donor 31 | rectum |
