| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv949609 |
chr18:39126941-40070286 |
Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1059409 |
chr18:39711099-40139446 |
Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv909572 |
chr18:39938510-40064000 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 4 |
nsv1055622 |
chr18:40040474-40057755 |
Enhancers Weak transcription
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv1056192 |
chr18:40040474-40058395 |
Enhancers Weak transcription
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv1062292 |
chr18:40044096-40057755 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
esv3447158 |
chr18:40045478-40320720 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1055614 |
chr18:40049038-40062317 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv1056694 |
chr18:40049038-40082667 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
esv2762899 |
chr18:40049050-40058395 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv909573 |
chr18:40050363-40131269 |
Enhancers Weak transcription Active TSS Flanking Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
esv3316757 |
chr18:40053713-40057996 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
esv3316755 |
chr18:40053943-40057768 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
esv3316756 |
chr18:40053979-40057849 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 15 |
esv3316754 |
chr18:40053995-40057738 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
nsv576747 |
chr18:40054104-40058395 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
nsv576748 |
chr18:40054104-40059621 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 18 |
esv2421511 |
chr18:40055787-40057767 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 19 |
nsv817790 |
chr18:40055787-40058893 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 20 |
nsv514867 |
chr18:40056410-40057730 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 21 |
nsv1058002 |
chr18:40056557-40076785 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 22 |
esv2760483 |
chr18:40056569-40060995 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page:
1
