Variant report

Variant	rs553952043
Chromosome Location	chr8:119926215-119926216
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:119424882..119426911-chr8:119926050..119928623,2	MCF-7	breast:
2	chr8:119918824..119921066-chr8:119925326..119927068,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868916	chr8:119911943-120762250	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv8383	chr8:119926155-119934422	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119918600-119926600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:119920600-119929200	Enhancers	HSMM	muscle
3	chr8:119921000-119927000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr8:119921200-119927200	Enhancers	NHDF-Ad	bronchial
5	chr8:119921200-119929000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr8:119921400-119927000	Enhancers	Muscle Satellite Cultured Cells	--
7	chr8:119921600-119926800	Enhancers	HSMMtube	muscle
8	chr8:119921800-119927000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr8:119921800-119927000	Enhancers	Osteobl	bone
10	chr8:119922000-119926800	Enhancers	NHLF	lung
11	chr8:119922400-119927000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr8:119923200-119926400	Weak transcription	NHEK	skin
13	chr8:119923600-119928200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr8:119924800-119926800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr8:119925200-119929200	Enhancers	Hela-S3	cervix
16	chr8:119925600-119926400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr8:119925600-119926600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr8:119925800-119926600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr8:119925800-119927000	Weak transcription	Pancreatic Islets	Pancreatic Islet
20	chr8:119926000-119926400	Weak transcription	NH-A	brain
21	chr8:119926000-119927200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr8:119926200-119927000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr8:119926200-119927000	Enhancers	HMEC	breast

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