Variant report

Variant	rs553968593
Chromosome Location	chr13:88384166-88384167
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv562631	chr13:88379124-88470185	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3371016	chr13:88381651-88384649	Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:88383600-88384200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
2	chr13:88383600-88384200	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
3	chr13:88383600-88384200	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr13:88383600-88384400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links