Variant report
| Variant | rs554004547 |
|---|---|
| Chromosome Location | chr12:56582404-56582405 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56580800-56582800 | Transcr. at gene 5' and 3' | Dnd41 | blood |
| 2 | chr12:56581000-56582600 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 3 | chr12:56581000-56582800 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 4 | chr12:56581000-56582800 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 5 | chr12:56581200-56582600 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 6 | chr12:56581200-56582600 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 7 | chr12:56581200-56582600 | Flanking Active TSS | Hela-S3 | cervix |
| 8 | chr12:56581200-56582800 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 9 | chr12:56581200-56582800 | Flanking Active TSS | Stomach Smooth Muscle | stomach |
| 10 | chr12:56581200-56582800 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 11 | chr12:56581400-56582600 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
| 12 | chr12:56581400-56582800 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 13 | chr12:56581400-56584600 | Active TSS | Fetal Kidney | kidney |
| 14 | chr12:56581400-56584800 | Active TSS | Colonic Mucosa | Colon |
| 15 | chr12:56581600-56582600 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 16 | chr12:56581600-56582600 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 17 | chr12:56581600-56582600 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 18 | chr12:56581600-56582600 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 19 | chr12:56581600-56582600 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 20 | chr12:56581600-56582600 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 21 | chr12:56581600-56582600 | Flanking Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr12:56581600-56582600 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
| 23 | chr12:56581600-56582600 | Flanking Active TSS | Fetal Adrenal Gland | Adrenal Gland |
| 24 | chr12:56581600-56582600 | Flanking Active TSS | NHEK | skin |
| 25 | chr12:56581600-56582600 | Flanking Active TSS | Osteobl | bone |
| 26 | chr12:56581600-56582800 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 27 | chr12:56581600-56582800 | Flanking Active TSS | Adipose Nuclei | Adipose |
| 28 | chr12:56581600-56582800 | Flanking Active TSS | HUVEC | blood vessel |
| 29 | chr12:56581600-56582800 | Flanking Active TSS | NH-A | brain |
| 30 | chr12:56581600-56583000 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 31 | chr12:56581800-56582600 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 32 | chr12:56581800-56582600 | Flanking Active TSS | Primary T helper naive cells from peripheral blood | blood |
| 33 | chr12:56581800-56582600 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 34 | chr12:56581800-56582600 | Flanking Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 35 | chr12:56581800-56582600 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 36 | chr12:56581800-56582600 | Flanking Active TSS | Brain Substantia Nigra | brain |
| 37 | chr12:56581800-56582600 | Flanking Active TSS | Left Ventricle | heart |
| 38 | chr12:56581800-56582600 | Flanking Active TSS | HepG2 | liver |
| 39 | chr12:56581800-56582600 | Flanking Active TSS | HMEC | breast |
| 40 | chr12:56581800-56582600 | Flanking Active TSS | HSMM | muscle |
| 41 | chr12:56581800-56582800 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
| 42 | chr12:56581800-56582800 | Flanking Active TSS | Primary B cells from peripheral blood | blood |
| 43 | chr12:56581800-56582800 | Flanking Active TSS | Primary T cells fromperipheralblood | blood |
| 44 | chr12:56581800-56582800 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 1 | blood |
| 45 | chr12:56581800-56582800 | Flanking Active TSS | Primary mononuclear cells fromperipheralblood | Blood |
| 46 | chr12:56581800-56582800 | Flanking Active TSS | Fetal Muscle Trunk | muscle |
| 47 | chr12:56581800-56582800 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 48 | chr12:56581800-56582800 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 49 | chr12:56581800-56582800 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 50 | chr12:56581800-56584600 | Active TSS | Pancreatic Islets | Pancreatic Islet |
