Variant report
| Variant | rs554065130 |
|---|---|
| Chromosome Location | chr11:76674175-76674176 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:76631400-76688400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 2 | chr11:76645800-76683800 | Weak transcription | Esophagus | oesophagus |
| 3 | chr11:76646600-76688000 | Weak transcription | HMEC | breast |
| 4 | chr11:76647200-76674800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 5 | chr11:76650600-76681200 | Weak transcription | Brain Substantia Nigra | brain |
| 6 | chr11:76655800-76674200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 7 | chr11:76655800-76681800 | Weak transcription | Primary B cells from cord blood | blood |
| 8 | chr11:76656200-76677000 | Weak transcription | Brain Anterior Caudate | brain |
| 9 | chr11:76657000-76674600 | Weak transcription | Fetal Stomach | stomach |
| 10 | chr11:76657000-76676600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 11 | chr11:76657200-76688400 | Weak transcription | Gastric | stomach |
| 12 | chr11:76660000-76710800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 13 | chr11:76661200-76674600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 14 | chr11:76663000-76674600 | Weak transcription | Liver | Liver |
| 15 | chr11:76665800-76688400 | Weak transcription | Right Ventricle | heart |
| 16 | chr11:76666800-76677600 | Weak transcription | Hela-S3 | cervix |
| 17 | chr11:76666800-76695400 | Weak transcription | NHEK | skin |
| 18 | chr11:76667800-76674400 | Weak transcription | Fetal Muscle Leg | muscle |
| 19 | chr11:76669000-76675200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr11:76669600-76674200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 21 | chr11:76670000-76674400 | Weak transcription | A549 | lung |
| 22 | chr11:76670200-76675200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 23 | chr11:76671600-76675400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 24 | chr11:76672000-76674800 | Weak transcription | Colon Smooth Muscle | Colon |
| 25 | chr11:76672200-76674400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 26 | chr11:76672200-76674600 | Weak transcription | Lung | lung |
| 27 | chr11:76672200-76674600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 28 | chr11:76672200-76675800 | Weak transcription | Spleen | Spleen |
| 29 | chr11:76672200-76676800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 30 | chr11:76672200-76677200 | Weak transcription | Ovary | ovary |
| 31 | chr11:76672200-76682600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 32 | chr11:76672200-76697800 | Weak transcription | Left Ventricle | heart |
| 33 | chr11:76672400-76696000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 34 | chr11:76672800-76674400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 35 | chr11:76672800-76674600 | Weak transcription | Brain Hippocampus Middle | brain |
| 36 | chr11:76673000-76675600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 37 | chr11:76673000-76689600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 38 | chr11:76673200-76675000 | Enhancers | Fetal Intestine Large | intestine |
| 39 | chr11:76673400-76674400 | Enhancers | HepG2 | liver |
| 40 | chr11:76673400-76674600 | Enhancers | Pancreas | Pancrea |
| 41 | chr11:76673400-76675000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 42 | chr11:76673400-76675200 | Enhancers | Fetal Thymus | thymus |
| 43 | chr11:76673400-76675200 | Enhancers | Stomach Mucosa | stomach |
| 44 | chr11:76673400-76676000 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
| 45 | chr11:76673400-76676000 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 46 | chr11:76673600-76674200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 47 | chr11:76673600-76674200 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 48 | chr11:76673600-76674200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 49 | chr11:76673600-76674400 | Enhancers | Small Intestine | intestine |
| 50 | chr11:76673600-76674600 | Enhancers | Primary T helper cells fromperipheralblood | blood |
