Variant report
| Variant | rs554076550 |
|---|---|
| Chromosome Location | chr12:57400833-57400834 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:57399200-57401000 | Enhancers | Stomach Mucosa | stomach |
| 2 | chr12:57399400-57401000 | Active TSS | Brain Hippocampus Middle | brain |
| 3 | chr12:57399400-57401400 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr12:57399600-57401000 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 5 | chr12:57399800-57401000 | Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 6 | chr12:57399800-57401000 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 7 | chr12:57400200-57401600 | Enhancers | Spleen | Spleen |
| 8 | chr12:57400200-57402000 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 9 | chr12:57400200-57402200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 10 | chr12:57400200-57402600 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 11 | chr12:57400400-57401000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 12 | chr12:57400400-57401000 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 13 | chr12:57400400-57401000 | Flanking Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 14 | chr12:57400400-57401000 | Flanking Active TSS | Colonic Mucosa | Colon |
| 15 | chr12:57400400-57401000 | Flanking Active TSS | Colon Smooth Muscle | Colon |
| 16 | chr12:57400400-57401000 | Flanking Active TSS | Stomach Smooth Muscle | stomach |
| 17 | chr12:57400400-57401200 | Flanking Active TSS | HepG2 | liver |
| 18 | chr12:57400400-57401400 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 19 | chr12:57400400-57401400 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 20 | chr12:57400400-57402200 | Weak transcription | Small Intestine | intestine |
| 21 | chr12:57400600-57401000 | Genic enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 22 | chr12:57400600-57401000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 23 | chr12:57400600-57401000 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 24 | chr12:57400600-57401000 | Flanking Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 25 | chr12:57400600-57401000 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 26 | chr12:57400600-57401000 | Flanking Active TSS | Adipose Nuclei | Adipose |
| 27 | chr12:57400600-57401000 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 28 | chr12:57400600-57401000 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
| 29 | chr12:57400600-57401000 | Flanking Active TSS | Fetal Intestine Small | intestine |
| 30 | chr12:57400600-57401000 | Enhancers | Gastric | stomach |
| 31 | chr12:57400600-57401000 | Enhancers | Pancreas | Pancrea |
| 32 | chr12:57400600-57401000 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 33 | chr12:57400600-57401200 | Enhancers | Fetal Heart | heart |
| 34 | chr12:57400600-57401200 | Enhancers | Lung | lung |
| 35 | chr12:57400600-57401400 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 36 | chr12:57400600-57401400 | Enhancers | Liver | Liver |
| 37 | chr12:57400600-57402000 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 38 | chr12:57400600-57402600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 39 | chr12:57400600-57402800 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 40 | chr12:57400600-57403200 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 41 | chr12:57400800-57401000 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 42 | chr12:57400800-57401000 | Flanking Active TSS | Brain Cingulate Gyrus | brain |
| 43 | chr12:57400800-57401000 | Enhancers | Brain Germinal Matrix | brain |
| 44 | chr12:57400800-57401000 | Enhancers | Esophagus | oesophagus |
| 45 | chr12:57400800-57401000 | Enhancers | Fetal Lung | lung |
| 46 | chr12:57400800-57401000 | Enhancers | Fetal Muscle Trunk | muscle |
| 47 | chr12:57400800-57401000 | Enhancers | Fetal Muscle Leg | muscle |
| 48 | chr12:57400800-57401000 | Enhancers | Placenta | Placenta |
| 49 | chr12:57400800-57401000 | Enhancers | Left Ventricle | heart |
| 50 | chr12:57400800-57401000 | Enhancers | Placenta Amnion | Placenta Amnion |
