Variant report

Variant rs554140675
Chromosome Location chr10:118893882-118893883
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:118890000-118894200 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
2 chr10:118890400-118899000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
3 chr10:118890600-118894600 Bivalent Enhancer Primary T cells fromperipheralblood blood
4 chr10:118890600-118894800 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
5 chr10:118890800-118894600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
6 chr10:118890800-118894600 Bivalent Enhancer Fetal Muscle Leg muscle
7 chr10:118890800-118894600 Bivalent Enhancer Fetal Stomach stomach
8 chr10:118891000-118894400 Bivalent/Poised TSS NHEK skin
9 chr10:118891800-118894600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
10 chr10:118892200-118894200 Bivalent/Poised TSS Fetal Brain Female brain
11 chr10:118892200-118894600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
12 chr10:118892400-118894200 Bivalent Enhancer Brain Cingulate Gyrus brain
13 chr10:118892600-118894400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
14 chr10:118892800-118894000 Bivalent/Poised TSS Right Ventricle heart
15 chr10:118893000-118894000 Active TSS Right Atrium heart
16 chr10:118893000-118894400 Bivalent Enhancer Lung lung
17 chr10:118893000-118894600 Bivalent Enhancer Fetal Brain Male brain
18 chr10:118893200-118894000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr10:118893200-118894400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
20 chr10:118893200-118894400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
21 chr10:118893200-118894400 Bivalent/Poised TSS Brain Angular Gyrus brain
22 chr10:118893200-118894600 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr10:118893200-118894600 Bivalent/Poised TSS Brain Substantia Nigra brain
24 chr10:118893400-118894000 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
25 chr10:118893400-118894000 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr10:118893400-118894000 Bivalent/Poised TSS Ovary ovary
27 chr10:118893400-118894000 Bivalent/Poised TSS Stomach Smooth Muscle stomach
28 chr10:118893400-118894200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
29 chr10:118893400-118894200 Bivalent/Poised TSS Brain Hippocampus Middle brain
30 chr10:118893400-118894200 Enhancers Gastric stomach
31 chr10:118893400-118894400 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr10:118893400-118894400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
33 chr10:118893400-118894400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
34 chr10:118893400-118894400 Bivalent/Poised TSS Psoas Muscle Psoas
35 chr10:118893400-118894600 Bivalent Enhancer Primary hematopoietic stem cells blood
36 chr10:118893400-118894800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
37 chr10:118893400-118894800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
38 chr10:118893600-118894000 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
39 chr10:118893600-118894000 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr10:118893600-118894000 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
41 chr10:118893600-118894000 Bivalent Enhancer Primary mononuclear cells fromperipheralblood Blood
42 chr10:118893600-118894000 Bivalent Enhancer Colonic Mucosa Colon
43 chr10:118893600-118894000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
44 chr10:118893600-118894200 Flanking Bivalent TSS/Enh H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr10:118893600-118894200 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
46 chr10:118893600-118894200 Bivalent Enhancer Fetal Muscle Trunk muscle
47 chr10:118893600-118894400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
48 chr10:118893600-118894400 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr10:118893600-118894400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr10:118893600-118894400 Active TSS Brain Anterior Caudate brain

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