Variant report

Variant rs554140747
Chromosome Location chr2:85974709-85974710
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:85971600-85975400 Enhancers Skeletal Muscle Male skeletal muscle
2 chr2:85971600-85977800 Weak transcription Pancreas Pancrea
3 chr2:85972200-85976200 Weak transcription Gastric stomach
4 chr2:85972400-85975800 Weak transcription Hela-S3 cervix
5 chr2:85972400-85976200 Weak transcription Stomach Mucosa stomach
6 chr2:85972400-85976800 Enhancers Primary B cells from cord blood blood
7 chr2:85972400-85978200 Enhancers Primary B cells from peripheral blood blood
8 chr2:85972800-85974800 Enhancers Brain Substantia Nigra brain
9 chr2:85972800-85975400 Weak transcription Liver Liver
10 chr2:85972800-85975600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr2:85972800-85975800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:85972800-85976000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr2:85972800-85977800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr2:85973000-85974800 Enhancers Muscle Satellite Cultured Cells --
15 chr2:85973000-85975000 Weak transcription HSMMtube muscle
16 chr2:85973000-85977800 Weak transcription Brain Germinal Matrix brain
17 chr2:85973000-85979000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:85973200-85974800 Weak transcription Fetal Heart heart
19 chr2:85973200-85976000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr2:85973400-85980200 Bivalent Enhancer Fetal Muscle Leg muscle
21 chr2:85973600-85975800 Weak transcription Aorta Aorta
22 chr2:85973600-85976000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:85973800-85975000 Weak transcription Adipose Nuclei Adipose
24 chr2:85973800-85975200 Weak transcription Psoas Muscle Psoas
25 chr2:85973800-85975200 Weak transcription Right Ventricle heart
26 chr2:85973800-85975400 Weak transcription Stomach Smooth Muscle stomach
27 chr2:85973800-85975600 Weak transcription Colon Smooth Muscle Colon
28 chr2:85973800-85975800 Weak transcription HSMM muscle
29 chr2:85973800-85976000 Weak transcription Brain Angular Gyrus brain
30 chr2:85973800-85976000 Weak transcription Brain Anterior Caudate brain
31 chr2:85973800-85976000 Weak transcription Brain Hippocampus Middle brain
32 chr2:85973800-85976000 Weak transcription Ovary ovary
33 chr2:85973800-85976000 Weak transcription Spleen Spleen
34 chr2:85973800-85976600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr2:85973800-85977800 Weak transcription Esophagus oesophagus
36 chr2:85974000-85975200 Weak transcription Fetal Lung lung
37 chr2:85974000-85975400 Weak transcription Thymus Thymus
38 chr2:85974000-85975800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr2:85974000-85975800 Weak transcription NHDF-Ad bronchial
40 chr2:85974000-85976000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr2:85974000-85976200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr2:85974200-85975400 Weak transcription Fetal Thymus thymus
43 chr2:85974200-85975600 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr2:85974200-85976000 Weak transcription Brain Cingulate Gyrus brain
45 chr2:85974400-85975200 Enhancers Osteobl bone
46 chr2:85974400-85975400 Weak transcription Lung lung
47 chr2:85974400-85975800 Enhancers Skeletal Muscle Female skeletal muscle
48 chr2:85974600-85974800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr2:85974600-85975200 Enhancers Monocytes-CD14+_RO01746 blood
50 chr2:85974600-85975400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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