Variant report

Variant	rs554204120
Chromosome Location	chr6:24325665-24325666
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:45 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601147	chr6:24322287-24326144	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv601148	chr6:24322287-24326596	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv601149	chr6:24322287-24327501	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv601150	chr6:24323858-24326596	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
5	nsv601151	chr6:24323858-24327501	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
6	nsv511339	chr6:24323858-24330240	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3473862	chr6:24324953-24328068	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv511857	chr6:24325054-24328406	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3473864	chr6:24325173-24329471	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv9426	chr6:24325231-24328038	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv823454	chr6:24325262-24328048	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3473866	chr6:24325277-24327916	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv13772	chr6:24325331-24327625	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
14	nsv823455	chr6:24325332-24327797	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
15	nsv823456	chr6:24325332-24328015	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv3473865	chr6:24325348-24327812	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
17	esv3473867	chr6:24325362-24327813	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
18	nsv823457	chr6:24325367-24327797	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv32656	chr6:24325570-24327514	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
20	esv1794019	chr6:24325585-24327685	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
21	esv1798796	chr6:24325585-24327685	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
22	nsv601152	chr6:24325627-24326596	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv1793596	chr6:24325627-24326820	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
24	nsv601153	chr6:24325627-24326820	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
25	nsv601154	chr6:24325627-24327173	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
26	nsv601155	chr6:24325627-24327299	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
27	nsv601156	chr6:24325627-24327322	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
28	nsv601157	chr6:24325627-24327481	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
29	esv1792263	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
30	esv1792560	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
31	esv1793441	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
32	esv1794752	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
33	esv1795654	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
34	esv1796814	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
35	esv1797628	chr6:24325627-24327501	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
36	esv1798827	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
37	esv1798886	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
38	esv1799427	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
39	esv1799774	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
40	esv1800323	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
41	esv1801760	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
42	esv1802187	chr6:24325627-24327501	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
43	esv1803645	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
44	nsv601158	chr6:24325627-24327501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
45	nsv601159	chr6:24325627-24329730	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24316400-24326800	Weak transcription	Pancreas	Pancrea
2	chr6:24324200-24329400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr6:24324400-24332000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr6:24324600-24329200	Weak transcription	NHEK	skin
5	chr6:24324600-24330000	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr6:24324600-24332000	Weak transcription	HMEC	breast
7	chr6:24324600-24332200	Weak transcription	HSMMtube	muscle
8	chr6:24324800-24329000	Weak transcription	Fetal Kidney	kidney
9	chr6:24325000-24329000	Weak transcription	NH-A	brain
10	chr6:24325000-24329400	Enhancers	HepG2	liver
11	chr6:24325600-24328200	Weak transcription	A549	lung

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