Variant report

Variant	rs554282148
Chromosome Location	chr7:122065603-122065604
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3436715	chr7:122064827-122070606	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122007400-122073000	Weak transcription	Lung	lung
2	chr7:122013800-122081800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr7:122022400-122095000	Weak transcription	Gastric	stomach
4	chr7:122047000-122155400	Weak transcription	Left Ventricle	heart
5	chr7:122055800-122071200	Weak transcription	Fetal Lung	lung
6	chr7:122056200-122122200	Weak transcription	Liver	Liver
7	chr7:122056600-122069600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr7:122057000-122071000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr7:122061200-122065800	Weak transcription	Pancreas	Pancrea
10	chr7:122061200-122095200	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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