Variant report

Variant rs554348946
Chromosome Location chr19:55874570-55874571
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:55866200-55880600 Weak transcription Right Atrium heart
2 chr19:55871400-55877000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr19:55871400-55880200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr19:55873400-55879800 Weak transcription HSMM muscle
5 chr19:55873600-55874600 Enhancers ES-WA7 Cell Line embryonic stem cell
6 chr19:55873600-55874600 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
7 chr19:55873600-55875200 Enhancers Placenta Placenta
8 chr19:55873600-55876200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr19:55874000-55874600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr19:55874000-55874600 Bivalent Enhancer Fetal Muscle Trunk muscle
11 chr19:55874000-55874600 Bivalent Enhancer Fetal Stomach stomach
12 chr19:55874000-55874800 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
13 chr19:55874000-55874800 Enhancers H1 Cell Line embryonic stem cell
14 chr19:55874000-55874800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:55874000-55874800 Enhancers HUES6 Cell Line embryonic stem cell
16 chr19:55874200-55874800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr19:55874200-55874800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr19:55874200-55874800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr19:55874200-55874800 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr19:55874200-55874800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
21 chr19:55874200-55874800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr19:55874200-55875000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr19:55874200-55875200 Enhancers A549 lung
24 chr19:55874400-55874600 Bivalent Enhancer HepG2 liver
25 chr19:55874400-55874800 Enhancers HUES48 Cell Line embryonic stem cell
26 chr19:55874400-55874800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
27 chr19:55874400-55875800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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